Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 AP000437.1-201ENST00000624057 2085 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 AGAP12P-201ENST00000585227 2359 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 AC093525.8-201ENST00000624099 1342 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 AL805961.2-201ENST00000642139 4817 ntBASIC12.29□□□□□ -0.44
HLA-AP01891 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.29□□□□□ -0.44
HLA-AP01891 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
HLA-AP01891 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.29□□□□□ -0.44
HLA-AP01891 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
HLA-AP01891 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HLA-AP01891 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
HLA-AP01891 AL645937.2-201ENST00000396808 931 ntBASIC12.28□□□□□ -0.44
HLA-AP01891 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.28□□□□□ -0.44
HLA-AP01891 PMS2P2-201ENST00000425039 1128 ntBASIC12.28□□□□□ -0.44
HLA-AP01891 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.28□□□□□ -0.44
HLA-AP01891 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.28□□□□□ -0.44
HLA-AP01891 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
HLA-AP01891 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
HLA-AP01891 AC125807.2-201ENST00000513358 3514 ntBASIC12.28□□□□□ -0.44
HLA-AP01891 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 PCDHA6-201ENST00000378126 3267 ntBASIC12.28□□□□□ -0.44
HLA-AP01891 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
HLA-AP01891 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC12.28□□□□□ -0.44
HLA-AP01891 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
HLA-AP01891 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-AP01891 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-AP01891 MKRN5P-201ENST00000445263 1467 ntBASIC12.27□□□□□ -0.44
HLA-AP01891 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
HLA-AP01891 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-AP01891 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-AP01891 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
HLA-AP01891 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
HLA-AP01891 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.27□□□□□ -0.44
HLA-AP01891 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-AP01891 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.27□□□□□ -0.44
HLA-AP01891 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.27□□□□□ -0.44
HLA-AP01891 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.27□□□□□ -0.44
HLA-AP01891 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
HLA-AP01891 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-AP01891 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.27□□□□□ -0.44
HLA-AP01891 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.27□□□□□ -0.44
HLA-AP01891 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
HLA-AP01891 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.27□□□□□ -0.45
HLA-AP01891 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
HLA-AP01891 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
HLA-AP01891 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-AP01891 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC12.27□□□□□ -0.45
HLA-AP01891 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.27□□□□□ -0.45
HLA-AP01891 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-AP01891 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-AP01891 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-AP01891 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
HLA-AP01891 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms