Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.24□□□□□ -0.13
CPNE6O95741 GCOM2-201ENST00000509133 1104 ntBASIC14.24□□□□□ -0.13
CPNE6O95741 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.24□□□□□ -0.13
CPNE6O95741 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
CPNE6O95741 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.24□□□□□ -0.13
CPNE6O95741 MIR3907-201ENST00000579424 151 ntBASIC14.24□□□□□ -0.13
CPNE6O95741 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE6O95741 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.24□□□□□ -0.13
CPNE6O95741 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.24□□□□□ -0.13
CPNE6O95741 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
CPNE6O95741 Z98259.2-201ENST00000641583 609 ntBASIC14.24□□□□□ -0.13
CPNE6O95741 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CPNE6O95741 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CPNE6O95741 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CPNE6O95741 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CPNE6O95741 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.24□□□□□ -0.13
CPNE6O95741 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 FAM90A7P-201ENST00000382628 1395 ntBASIC14.23□□□□□ -0.13
CPNE6O95741 FAM90A23P-201ENST00000400136 1395 ntBASIC14.23□□□□□ -0.13
CPNE6O95741 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CPNE6O95741 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CPNE6O95741 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE6O95741 AL596276.2-201ENST00000447525 331 ntBASIC14.23□□□□□ -0.13
CPNE6O95741 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE6O95741 CICP12-201ENST00000455801 843 ntBASIC14.23□□□□□ -0.13
CPNE6O95741 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE6O95741 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE6O95741 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CPNE6O95741 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 AC131206.1-201ENST00000538078 1211 ntBASIC14.23□□□□□ -0.13
CPNE6O95741 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE6O95741 AC005962.1-201ENST00000584100 773 ntBASIC14.23□□□□□ -0.13
CPNE6O95741 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 AC079336.7-201ENST00000623428 1078 ntBASIC14.23□□□□□ -0.13
CPNE6O95741 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.23□□□□□ -0.13
CPNE6O95741 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.23□□□□□ -0.13
CPNE6O95741 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CPNE6O95741 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CPNE6O95741 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE6O95741 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE6O95741 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CPNE6O95741 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CPNE6O95741 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms