Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.57■□□□□ 0.08
CSPG5O95196 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CSPG5O95196 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.56■□□□□ 0.08
CSPG5O95196 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.56■□□□□ 0.08
CSPG5O95196 KRT18P36-201ENST00000411618 1276 ntBASIC15.56■□□□□ 0.08
CSPG5O95196 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC15.56■□□□□ 0.08
CSPG5O95196 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 AL136172.1-201ENST00000598590 1394 ntBASIC15.56■□□□□ 0.08
CSPG5O95196 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.56■□□□□ 0.08
CSPG5O95196 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.56■□□□□ 0.08
CSPG5O95196 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CSPG5O95196 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
CSPG5O95196 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CSPG5O95196 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CSPG5O95196 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.56■□□□□ 0.08
CSPG5O95196 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CSPG5O95196 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CSPG5O95196 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.55■□□□□ 0.08
CSPG5O95196 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CSPG5O95196 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.55■□□□□ 0.08
CSPG5O95196 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.55■□□□□ 0.08
CSPG5O95196 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.55■□□□□ 0.08
CSPG5O95196 AL035414.1-201ENST00000451327 857 ntBASIC15.55■□□□□ 0.08
CSPG5O95196 FTH1P22-201ENST00000456305 520 ntBASIC15.55■□□□□ 0.08
CSPG5O95196 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
CSPG5O95196 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.55■□□□□ 0.08
CSPG5O95196 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 AC005357.2-202ENST00000590507 1060 ntBASIC15.55■□□□□ 0.08
CSPG5O95196 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.55■□□□□ 0.08
CSPG5O95196 AC105137.3-201ENST00000617588 984 ntBASIC15.55■□□□□ 0.08
CSPG5O95196 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.55■□□□□ 0.08
CSPG5O95196 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CSPG5O95196 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CSPG5O95196 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.55■□□□□ 0.08
CSPG5O95196 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.55■□□□□ 0.08
CSPG5O95196 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CSPG5O95196 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms