Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TMEM88BA6NKF7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 RNA5SP491-201ENST00000362936 118 ntBASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AC004910.1-201ENST00000433493 787 ntBASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AL161932.2-201ENST00000435436 679 ntBASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AL450346.2-201ENST00000495602 1024 ntBASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AC233724.9-201ENST00000511694 407 ntBASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 COQ10BP2-201ENST00000513804 724 ntBASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TMEM88BA6NKF7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 HNRNPA1P59-201ENST00000430583 918 ntBASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 CA5BP1-205ENST00000435806 1064 ntBASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 HLA-W-207ENST00000439514 771 ntBASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 SNX20-205ENST00000610485 557 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 AC138627.1-201ENST00000641127 1257 ntBASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 GUCY2EP-203ENST00000531117 1918 ntBASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.36■□□□□ 0.21
TMEM88BA6NKF7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 MIR193A-201ENST00000384882 88 ntBASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 U3.41-201ENST00000408711 219 ntBASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
TMEM88BA6NKF7 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 233.7 ms