Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LOC102724428A0A0B4J2F2 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC18.02■□□□□ 0.47
LOC102724428A0A0B4J2F2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LOC102724428A0A0B4J2F2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LOC102724428A0A0B4J2F2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
LOC102724428A0A0B4J2F2 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LOC102724428A0A0B4J2F2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.02■□□□□ 0.47
LOC102724428A0A0B4J2F2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LOC102724428A0A0B4J2F2 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 NHP2P1-201ENST00000335274 462 ntBASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 SERBP1P2-201ENST00000436888 1164 ntBASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 NRADDP-201ENST00000437305 691 ntBASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 AC092896.1-201ENST00000465850 380 ntBASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 MT3-202ENST00000561640 514 ntTSL 3 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 AC018846.1-201ENST00000568231 183 ntBASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 AL049840.2-201ENST00000602722 535 ntBASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 AC139713.2-207ENST00000641556 1292 ntBASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LOC102724428A0A0B4J2F2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 TCAF2P1-201ENST00000291129 2421 ntBASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 NALT1-202ENST00000450304 437 ntTSL 3 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 KRT18P15-201ENST00000458108 1291 ntBASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 ESR1-214ENST00000638569 132 ntTSL 5 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LOC102724428A0A0B4J2F2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms