Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 AL391647.1-201ENST00000395664 511 ntBASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 AC044860.1-202ENST00000559481 777 ntBASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 AC138761.1-201ENST00000584393 385 ntBASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 AC120114.3-201ENST00000611923 658 ntBASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 AP000437.1-201ENST00000624057 2085 ntBASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 VENTXP1-201ENST00000569334 2716 ntBASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AL645937.6-201ENST00000641122 3727 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AC136604.1-202ENST00000425471 771 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AC022616.1-201ENST00000518688 554 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AC103988.2-201ENST00000561804 725 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 MTDHP5-201ENST00000598980 586 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AL596442.2-201ENST00000610240 980 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AL138828.2-201ENST00000615812 383 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AC139712.1-201ENST00000378256 1875 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 AC125807.2-201ENST00000513358 3514 ntBASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
RCL1Q9Y2P8 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms