Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 AL512430.1-201ENST00000392575 860 ntBASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 AC073869.2-201ENST00000417338 1026 ntBASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 CHCHD2P9-201ENST00000461726 456 ntBASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 RN7SL181P-201ENST00000462921 277 ntBASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 AC063926.3-201ENST00000624734 5658 ntBASIC17.41■□□□□ 0.38
DENND2AQ9ULE3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 AC007191.1-201ENST00000623179 2995 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 AC090505.1-201ENST00000430515 1834 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 AL627422.1-201ENST00000434104 580 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 AC078991.1-201ENST00000437297 610 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 ALG1L13P-202ENST00000519320 584 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 AL031713.1-201ENST00000564813 661 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 AC092171.5-201ENST00000608012 942 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 AC242376.2-201ENST00000619355 883 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 COX6A1P2-201ENST00000620597 330 ntBASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.4■□□□□ 0.38
DENND2AQ9ULE3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.39■□□□□ 0.38
DENND2AQ9ULE3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
DENND2AQ9ULE3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 ELP5-212ENST00000574255 671 ntTSL 2 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 YRDCP1-201ENST00000621419 643 ntBASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DENND2AQ9ULE3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms