Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 NHP2P1-201ENST00000335274 462 ntBASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 MIR1307-201ENST00000408840 149 ntBASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AC025594.1-201ENST00000469533 543 ntBASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 RPS18P9-201ENST00000482817 460 ntBASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AL359219.1-201ENST00000556311 934 ntBASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AL590235.1-201ENST00000564650 861 ntBASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AC139713.2-207ENST00000641556 1292 ntBASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC20.19■□□□□ 0.82
SLC52A1Q9NWF4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 AC106827.1-201ENST00000366454 431 ntBASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 RHOC-205ENST00000369636 786 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 GOLGA6L16P-201ENST00000441780 1299 ntBASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 AC092612.1-201ENST00000514501 998 ntBASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 AC078814.4-201ENST00000546650 327 ntBASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 RN7SL121P-201ENST00000584223 273 ntBASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 PES1P2-201ENST00000449745 1735 ntBASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC52A1Q9NWF4 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 AC068760.1-201ENST00000493579 1953 ntBASIC20.17■□□□□ 0.82
SLC52A1Q9NWF4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms