Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 BRD7P5-201ENST00000299197 1822 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LBH-202ENST00000401506 485 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 TSPY25P-201ENST00000429463 745 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC092580.1-201ENST00000433998 658 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 XBP1P1-201ENST00000436573 652 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC078991.1-201ENST00000437297 610 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LDHBP1-201ENST00000455730 1119 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 RN7SL181P-201ENST00000462921 277 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 MRPL22P1-201ENST00000505398 616 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ALG3P1-201ENST00000508806 1114 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC118465.1-201ENST00000513820 1271 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC105233.3-201ENST00000531125 744 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 MIR3180-2-201ENST00000581748 88 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 RPL17P45-201ENST00000586289 509 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC008825.2-201ENST00000603374 718 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC005041.3-201ENST00000606287 649 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AL022334.2-201ENST00000610000 484 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 MIR7845-201ENST00000618396 99 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC100757.4-201ENST00000626934 759 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AL161772.1-201ENST00000610494 4412 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC111170.3-201ENST00000624282 2464 ntBASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC4.91□□□□□ -1.62
KRTAP4-3Q9BYR4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms