Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 MIR663B-201ENST00000408361 115 ntBASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 MTX1P1-201ENST00000440904 838 ntBASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 OR2R1P-201ENST00000441404 914 ntBASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDLIM5Q96HC4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.08□□□□□ -0.15
PDLIM5Q96HC4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
PDLIM5Q96HC4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDLIM5Q96HC4 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDLIM5Q96HC4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
PDLIM5Q96HC4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PDLIM5Q96HC4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PDLIM5Q96HC4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.08□□□□□ -0.15
PDLIM5Q96HC4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 HMGA1P1-201ENST00000415560 1062 ntBASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 RPL18P13-201ENST00000478088 569 ntBASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 SCARNA21-201ENST00000517026 139 ntBASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 BNIP3P13-201ENST00000599968 566 ntBASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 AC072061.1-201ENST00000569710 2234 ntBASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.08□□□□□ -0.16
PDLIM5Q96HC4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.07□□□□□ -0.16
PDLIM5Q96HC4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms