Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 HNRNPA1P21-201ENST00000424115 961 ntBASIC16.59■□□□□ 0.25
CDCA5Q96FF9 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 AL359219.1-201ENST00000556311 934 ntBASIC16.59■□□□□ 0.25
CDCA5Q96FF9 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 RPL13AP3-202ENST00000494676 1473 ntBASIC16.59■□□□□ 0.25
CDCA5Q96FF9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.59■□□□□ 0.25
CDCA5Q96FF9 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.58■□□□□ 0.25
CDCA5Q96FF9 AC138035.3-201ENST00000622706 2791 ntBASIC16.58■□□□□ 0.25
CDCA5Q96FF9 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 AC004801.1-201ENST00000549557 360 ntBASIC16.58■□□□□ 0.24
CDCA5Q96FF9 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 AL512310.5-201ENST00000551999 515 ntBASIC16.58■□□□□ 0.24
CDCA5Q96FF9 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 ANKRD26P1-203ENST00000569528 966 ntBASIC16.58■□□□□ 0.24
CDCA5Q96FF9 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 AC232323.1-201ENST00000540724 2099 ntBASIC16.58■□□□□ 0.24
CDCA5Q96FF9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDCA5Q96FF9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 ACTBP14-201ENST00000411655 1089 ntBASIC16.57■□□□□ 0.24
CDCA5Q96FF9 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 AC113347.2-201ENST00000512350 279 ntBASIC16.57■□□□□ 0.24
CDCA5Q96FF9 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 PMEL-214ENST00000550447 901 ntTSL 3 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 RN7SL605P-201ENST00000577229 281 ntBASIC16.57■□□□□ 0.24
CDCA5Q96FF9 RN7SL602P-201ENST00000578326 324 ntBASIC16.57■□□□□ 0.24
CDCA5Q96FF9 RN7SL718P-201ENST00000581254 303 ntBASIC16.57■□□□□ 0.24
CDCA5Q96FF9 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.57■□□□□ 0.24
CDCA5Q96FF9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms