Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 RPSAP36-202ENST00000494591 1261 ntBASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AC021016.3-201ENST00000608367 477 ntBASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AP000346.4-201ENST00000614827 381 ntBASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AC027601.5-201ENST00000624065 2482 ntBASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SRFBP1Q8NEF9 AC131212.3-201ENST00000624087 4219 ntBASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 AC041040.2-201ENST00000622926 2899 ntBASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 MIR663B-201ENST00000408361 115 ntBASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 POM121L10P-201ENST00000436994 1285 ntBASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 Z98259.2-201ENST00000641583 609 ntBASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SRFBP1Q8NEF9 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.84□□□□□ -0.19
SRFBP1Q8NEF9 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms