Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.77■□□□□ 0.12
VPS52Q8N1B4 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.77■□□□□ 0.12
VPS52Q8N1B4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.77■□□□□ 0.12
VPS52Q8N1B4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.77■□□□□ 0.12
VPS52Q8N1B4 IQSEC3P1-201ENST00000538799 536 ntBASIC15.77■□□□□ 0.12
VPS52Q8N1B4 AC103691.2-201ENST00000618824 433 ntBASIC15.77■□□□□ 0.12
VPS52Q8N1B4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS52Q8N1B4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
VPS52Q8N1B4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.77■□□□□ 0.12
VPS52Q8N1B4 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.77■□□□□ 0.11
VPS52Q8N1B4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
VPS52Q8N1B4 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 AL157407.1-201ENST00000435784 904 ntBASIC15.75■□□□□ 0.11
VPS52Q8N1B4 NOC2LP1-201ENST00000450578 752 ntBASIC15.75■□□□□ 0.11
VPS52Q8N1B4 AL035414.1-201ENST00000451327 857 ntBASIC15.75■□□□□ 0.11
VPS52Q8N1B4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
VPS52Q8N1B4 RN7SL555P-201ENST00000584742 339 ntBASIC15.75■□□□□ 0.11
VPS52Q8N1B4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms