Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 PCDHA3-202ENST00000532566 4594 ntBASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 AC139749.1-202ENST00000617529 3139 ntBASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.99■□□□□ 0.15
CCDC60Q8IWA6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 LINC00115-201ENST00000473798 1317 ntBASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 AC073869.2-201ENST00000417338 1026 ntBASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 AC103810.10-201ENST00000606504 343 ntBASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 BX640514.1-201ENST00000583223 1918 ntBASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CCDC60Q8IWA6 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 AC018635.2-201ENST00000608625 364 ntBASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 AL805961.1-201ENST00000642026 753 ntBASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 AC005912.2-201ENST00000619492 2400 ntBASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 AC067931.2-201ENST00000623655 2003 ntBASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC60Q8IWA6 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC60Q8IWA6 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms