Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATPAF1Q5TC12 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 MSTO2P-201ENST00000314835 1709 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AC073869.1-201ENST00000415574 2762 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AC083964.2-201ENST00000623988 2396 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AC092933.1-201ENST00000393644 945 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AC004945.1-201ENST00000416738 983 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 EIF3FP3-201ENST00000434851 1086 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 RN7SL48P-201ENST00000579283 293 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AC145423.3-201ENST00000615987 467 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 CES1P1-201ENST00000421606 1704 ntBASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.65□□□□□ -0.38
ATPAF1Q5TC12 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms