Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 AP001972.5-201ENST00000624624 2338 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 AP003969.2-201ENST00000623739 2275 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 AL138725.1-201ENST00000407347 1314 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 MCCD1P2-201ENST00000423228 335 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 AC107373.2-201ENST00000607735 490 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 AC104506.1-201ENST00000609247 429 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 C20orf181-201ENST00000623918 480 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 AC073862.5-201ENST00000624129 2027 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 LINC02486-201ENST00000604157 3000 ntBASIC13.23□□□□□ -0.29
RBM48Q5RL73 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RBM48Q5RL73 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.23□□□□□ -0.29
RBM48Q5RL73 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 AC015819.3-201ENST00000624305 2674 ntBASIC13.22□□□□□ -0.29
RBM48Q5RL73 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RBM48Q5RL73 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 SDHAP3-202ENST00000515467 728 ntBASIC13.22□□□□□ -0.29
RBM48Q5RL73 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 JPT2-214ENST00000569765 782 ntTSL 2 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.22□□□□□ -0.29
RBM48Q5RL73 AC120114.3-201ENST00000611923 658 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms