Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.1□□□□□ -0.15
YBX1P67809 FAM8A2P-201ENST00000528813 1142 ntBASIC14.1□□□□□ -0.15
YBX1P67809 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.1□□□□□ -0.15
YBX1P67809 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.1□□□□□ -0.15
YBX1P67809 AL008638.5-201ENST00000623814 1298 ntBASIC14.1□□□□□ -0.15
YBX1P67809 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 AL008718.2-201ENST00000609206 1313 ntBASIC14.1□□□□□ -0.15
YBX1P67809 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 TCAF1P1-201ENST00000414990 2232 ntBASIC14.1□□□□□ -0.15
YBX1P67809 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 NUTM2HP-201ENST00000442076 2498 ntBASIC14.09□□□□□ -0.15
YBX1P67809 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 AC020658.7-201ENST00000624274 2442 ntBASIC14.09□□□□□ -0.15
YBX1P67809 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
YBX1P67809 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.09□□□□□ -0.15
YBX1P67809 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 AC104073.2-201ENST00000453737 312 ntBASIC14.09□□□□□ -0.15
YBX1P67809 AC021723.1-201ENST00000486306 515 ntBASIC14.09□□□□□ -0.15
YBX1P67809 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.09□□□□□ -0.15
YBX1P67809 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 AL160314.3-201ENST00000556041 767 ntBASIC14.09□□□□□ -0.15
YBX1P67809 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.09□□□□□ -0.15
YBX1P67809 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 AC007663.3-201ENST00000609632 465 ntBASIC14.09□□□□□ -0.15
YBX1P67809 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.09□□□□□ -0.15
YBX1P67809 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
YBX1P67809 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
YBX1P67809 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
YBX1P67809 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.09□□□□□ -0.15
YBX1P67809 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.08□□□□□ -0.15
YBX1P67809 AC090643.2-201ENST00000623442 2029 ntBASIC14.08□□□□□ -0.15
YBX1P67809 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
YBX1P67809 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
YBX1P67809 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
YBX1P67809 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
YBX1P67809 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.08□□□□□ -0.16
YBX1P67809 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.08□□□□□ -0.16
YBX1P67809 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
YBX1P67809 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
YBX1P67809 AC004899.1-201ENST00000424687 1714 ntBASIC14.08□□□□□ -0.16
YBX1P67809 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms