Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CSNK1A1P48729 AC244394.1-201ENST00000435000 1665 ntBASIC12.93□□□□□ -0.34
CSNK1A1P48729 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSNK1A1P48729 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 HSPA8P5-201ENST00000456928 2069 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 GK-202ENST00000378941 458 ntTSL 3 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 AL354877.1-201ENST00000424412 413 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 AL161932.2-201ENST00000435436 679 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 AL157407.1-201ENST00000435784 904 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 AL645933.1-201ENST00000440087 609 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 BNIP3P42-201ENST00000454982 569 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 AC136759.1-202ENST00000530858 2194 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 BNIP3P29-201ENST00000598302 571 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 AC011447.5-201ENST00000616168 564 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 AC016397.2-201ENST00000624848 1985 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 TCAM1P-207ENST00000485295 1537 ntBASIC12.92□□□□□ -0.34
CSNK1A1P48729 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.92□□□□□ -0.34
CSNK1A1P48729 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSNK1A1P48729 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSNK1A1P48729 AC012441.2-201ENST00000444843 739 ntBASIC12.91□□□□□ -0.34
CSNK1A1P48729 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CSNK1A1P48729 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 164 ms