Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USP6P35125 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USP6P35125 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
USP6P35125 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 OR51A9P-201ENST00000422578 911 ntBASIC19.06■□□□□ 0.64
USP6P35125 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
USP6P35125 GALP-202ENST00000440823 889 ntTSL 5 BASIC19.06■□□□□ 0.64
USP6P35125 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USP6P35125 RN7SL147P-201ENST00000487345 298 ntBASIC19.06■□□□□ 0.64
USP6P35125 CISD2-202ENST00000503643 808 ntTSL 2 BASIC19.06■□□□□ 0.64
USP6P35125 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 GARS-210ENST00000627489 324 ntTSL 4 BASIC19.06■□□□□ 0.64
USP6P35125 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC19.06■□□□□ 0.64
USP6P35125 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP6P35125 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USP6P35125 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
USP6P35125 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6P35125 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6P35125 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6P35125 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6P35125 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC19.05■□□□□ 0.64
USP6P35125 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6P35125 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6P35125 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC19.05■□□□□ 0.64
USP6P35125 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 AL139339.2-201ENST00000608063 657 ntBASIC19.05■□□□□ 0.64
USP6P35125 AP001527.2-201ENST00000614441 631 ntBASIC19.05■□□□□ 0.64
USP6P35125 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
USP6P35125 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.05■□□□□ 0.64
USP6P35125 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
USP6P35125 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC19.05■□□□□ 0.64
USP6P35125 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC19.04■□□□□ 0.64
USP6P35125 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
USP6P35125 AC144831.1-201ENST00000573312 2656 ntBASIC19.04■□□□□ 0.64
USP6P35125 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 FKBP4P8-201ENST00000610931 1369 ntBASIC19.04■□□□□ 0.64
USP6P35125 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 PIFO-201ENST00000369737 746 ntTSL 2 BASIC19.04■□□□□ 0.64
USP6P35125 AP000354.1-201ENST00000396982 456 ntBASIC19.04■□□□□ 0.64
USP6P35125 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
USP6P35125 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 ASS1P2-201ENST00000439895 1223 ntBASIC19.04■□□□□ 0.64
USP6P35125 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC19.04■□□□□ 0.64
USP6P35125 RN7SL128P-201ENST00000467883 305 ntBASIC19.04■□□□□ 0.64
USP6P35125 APOC1-209ENST00000592885 562 ntTSL 3 BASIC19.04■□□□□ 0.64
USP6P35125 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC19.04■□□□□ 0.64
USP6P35125 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
USP6P35125 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC19.03■□□□□ 0.64
USP6P35125 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
USP6P35125 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
USP6P35125 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
USP6P35125 DKKL1P1-201ENST00000400550 698 ntBASIC19.03■□□□□ 0.64
USP6P35125 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms