Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC14.38□□□□□ -0.11
VARSP26640 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.38□□□□□ -0.11
VARSP26640 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VARSP26640 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.38□□□□□ -0.11
VARSP26640 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.38□□□□□ -0.11
VARSP26640 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.38□□□□□ -0.11
VARSP26640 AL158211.2-201ENST00000607282 395 ntBASIC14.38□□□□□ -0.11
VARSP26640 AC138696.2-201ENST00000607376 223 ntBASIC14.38□□□□□ -0.11
VARSP26640 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 CICP16-201ENST00000502609 2813 ntBASIC14.38□□□□□ -0.11
VARSP26640 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VARSP26640 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 MST1P2-201ENST00000457982 2291 ntBASIC14.38□□□□□ -0.11
VARSP26640 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VARSP26640 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VARSP26640 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VARSP26640 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 AL136172.1-201ENST00000598590 1394 ntBASIC14.37□□□□□ -0.11
VARSP26640 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VARSP26640 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.37□□□□□ -0.11
VARSP26640 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VARSP26640 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.37□□□□□ -0.11
VARSP26640 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.37□□□□□ -0.11
VARSP26640 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 AC023310.1-201ENST00000554836 735 ntBASIC14.37□□□□□ -0.11
VARSP26640 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.37□□□□□ -0.11
VARSP26640 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 AC132938.4-201ENST00000623835 848 ntBASIC14.37□□□□□ -0.11
VARSP26640 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.37□□□□□ -0.11
VARSP26640 RHOXF1P1-202ENST00000635473 501 ntBASIC14.37□□□□□ -0.11
VARSP26640 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.37□□□□□ -0.11
VARSP26640 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
VARSP26640 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.37□□□□□ -0.11
VARSP26640 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VARSP26640 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VARSP26640 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms