Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.46□□□□□ -0.42
CD40P25942 CICP24-201ENST00000605464 2705 ntBASIC12.46□□□□□ -0.42
CD40P25942 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CD40P25942 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CD40P25942 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 ST20-AS1-201ENST00000560255 4223 ntBASIC12.45□□□□□ -0.42
CD40P25942 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.45□□□□□ -0.42
CD40P25942 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.45□□□□□ -0.42
CD40P25942 RPL8P2-201ENST00000430538 502 ntBASIC12.45□□□□□ -0.42
CD40P25942 RPSAP15-201ENST00000448168 861 ntBASIC12.45□□□□□ -0.42
CD40P25942 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 RN7SL277P-201ENST00000481521 288 ntBASIC12.45□□□□□ -0.42
CD40P25942 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.45□□□□□ -0.42
CD40P25942 PRKXP1-201ENST00000561423 1122 ntBASIC12.45□□□□□ -0.42
CD40P25942 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.45□□□□□ -0.42
CD40P25942 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.45□□□□□ -0.42
CD40P25942 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.45□□□□□ -0.42
CD40P25942 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.45□□□□□ -0.42
CD40P25942 AC104506.1-201ENST00000609247 429 ntBASIC12.45□□□□□ -0.42
CD40P25942 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.45□□□□□ -0.42
CD40P25942 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
CD40P25942 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CD40P25942 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.45□□□□□ -0.42
CD40P25942 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
CD40P25942 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC12.44□□□□□ -0.42
CD40P25942 AC091046.1-201ENST00000331871 207 ntBASIC12.44□□□□□ -0.42
CD40P25942 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
CD40P25942 AL627231.1-201ENST00000394467 1125 ntBASIC12.44□□□□□ -0.42
CD40P25942 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CD40P25942 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CD40P25942 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms