Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CAPN2P17655 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN2P17655 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CAPN2P17655 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CAPN2P17655 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN2P17655 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.78■□□□□ 0.28
CAPN2P17655 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CAPN2P17655 AC093752.3-201ENST00000567343 901 ntBASIC16.78■□□□□ 0.28
CAPN2P17655 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.78■□□□□ 0.28
CAPN2P17655 RN7SL596P-201ENST00000582123 288 ntBASIC16.78■□□□□ 0.28
CAPN2P17655 AC008805.1-201ENST00000590892 364 ntBASIC16.78■□□□□ 0.28
CAPN2P17655 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.78■□□□□ 0.28
CAPN2P17655 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CAPN2P17655 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN2P17655 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CAPN2P17655 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CAPN2P17655 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.78■□□□□ 0.28
CAPN2P17655 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN2P17655 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN2P17655 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CAPN2P17655 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN2P17655 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
CAPN2P17655 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CAPN2P17655 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.77■□□□□ 0.28
CAPN2P17655 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN2P17655 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPN2P17655 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPN2P17655 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CAPN2P17655 C2orf69P1-201ENST00000563532 1093 ntBASIC16.77■□□□□ 0.28
CAPN2P17655 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.77■□□□□ 0.28
CAPN2P17655 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPN2P17655 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN2P17655 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.77■□□□□ 0.28
CAPN2P17655 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.77■□□□□ 0.28
CAPN2P17655 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CAPN2P17655 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 AC138466.4-201ENST00000623965 852 ntBASIC16.77■□□□□ 0.28
CAPN2P17655 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CAPN2P17655 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC16.77■□□□□ 0.27
CAPN2P17655 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CAPN2P17655 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.77■□□□□ 0.27
CAPN2P17655 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.27
CAPN2P17655 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
CAPN2P17655 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.77■□□□□ 0.27
CAPN2P17655 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CAPN2P17655 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN2P17655 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CAPN2P17655 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN2P17655 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.76■□□□□ 0.27
CAPN2P17655 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CAPN2P17655 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms