Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CAPN1P07384 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CAPN1P07384 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPN1P07384 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN1P07384 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAPN1P07384 AC020910.6-201ENST00000623084 1459 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 MIR1247-201ENST00000408206 136 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 AC245100.3-201ENST00000441281 285 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 HOMER2P2-201ENST00000451621 847 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 Z93015.1-201ENST00000451718 390 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.34□□□□□ -0.11
CAPN1P07384 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.34□□□□□ -0.11
CAPN1P07384 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.34□□□□□ -0.11
CAPN1P07384 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN1P07384 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 AC138696.2-201ENST00000607376 223 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CAPN1P07384 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 AL359881.3-201ENST00000602640 1721 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAPN1P07384 CICP16-201ENST00000502609 2813 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPN1P07384 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPN1P07384 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CAPN1P07384 AC011498.7-201ENST00000624986 2027 ntBASIC14.34□□□□□ -0.11
CAPN1P07384 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CAPN1P07384 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPN1P07384 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN1P07384 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN1P07384 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN1P07384 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN1P07384 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN1P07384 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.33□□□□□ -0.11
CAPN1P07384 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN1P07384 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CAPN1P07384 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN1P07384 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPN1P07384 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.33□□□□□ -0.11
CAPN1P07384 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CAPN1P07384 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CAPN1P07384 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN1P07384 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN1P07384 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPN1P07384 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPN1P07384 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 AL133338.1-201ENST00000565695 1517 ntBASIC14.33□□□□□ -0.12
CAPN1P07384 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CAPN1P07384 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPN1P07384 POM121L8P-201ENST00000417732 1281 ntBASIC14.33□□□□□ -0.12
CAPN1P07384 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.33□□□□□ -0.12
CAPN1P07384 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPN1P07384 POM121L9P-203ENST00000441984 1285 ntBASIC14.33□□□□□ -0.12
CAPN1P07384 CNN2P10-201ENST00000443067 918 ntBASIC14.33□□□□□ -0.12
CAPN1P07384 AL591846.1-201ENST00000451736 433 ntBASIC14.33□□□□□ -0.12
CAPN1P07384 AC099548.2-209ENST00000480264 625 ntBASIC14.33□□□□□ -0.12
CAPN1P07384 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms