Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 EIF3FP3-201ENST00000434851 1086 ntBASIC12.32□□□□□ -0.44
CD3DP04234 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.32□□□□□ -0.44
CD3DP04234 AC114501.2-201ENST00000439631 535 ntBASIC12.32□□□□□ -0.44
CD3DP04234 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.32□□□□□ -0.44
CD3DP04234 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 YBX1P5-201ENST00000509441 847 ntBASIC12.32□□□□□ -0.44
CD3DP04234 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 ZNF890P-202ENST00000530367 1156 ntBASIC12.32□□□□□ -0.44
CD3DP04234 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.32□□□□□ -0.44
CD3DP04234 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.32□□□□□ -0.44
CD3DP04234 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.32□□□□□ -0.44
CD3DP04234 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 AL662799.1-202ENST00000614205 422 ntBASIC12.32□□□□□ -0.44
CD3DP04234 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.32□□□□□ -0.44
CD3DP04234 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.32□□□□□ -0.44
CD3DP04234 AC087499.5-201ENST00000452760 1342 ntBASIC12.32□□□□□ -0.44
CD3DP04234 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.32□□□□□ -0.44
CD3DP04234 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CD3DP04234 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
CD3DP04234 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
CD3DP04234 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CD3DP04234 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.31□□□□□ -0.44
CD3DP04234 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
CD3DP04234 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.31□□□□□ -0.44
CD3DP04234 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
CD3DP04234 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CD3DP04234 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.31□□□□□ -0.44
CD3DP04234 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.31□□□□□ -0.44
CD3DP04234 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.31□□□□□ -0.44
CD3DP04234 GIMAP3P-201ENST00000495150 836 ntBASIC12.31□□□□□ -0.44
CD3DP04234 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.31□□□□□ -0.44
CD3DP04234 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.31□□□□□ -0.44
CD3DP04234 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.31□□□□□ -0.44
CD3DP04234 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.31□□□□□ -0.44
CD3DP04234 AC069262.1-201ENST00000539058 672 ntBASIC12.31□□□□□ -0.44
CD3DP04234 AC036164.1-201ENST00000570544 333 ntBASIC12.31□□□□□ -0.44
CD3DP04234 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.31□□□□□ -0.44
CD3DP04234 AC073592.8-201ENST00000624126 511 ntBASIC12.31□□□□□ -0.44
CD3DP04234 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.31□□□□□ -0.44
CD3DP04234 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC12.31□□□□□ -0.44
CD3DP04234 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CD3DP04234 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CD3DP04234 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CD3DP04234 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.31□□□□□ -0.44
CD3DP04234 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CD3DP04234 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CD3DP04234 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms