Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CHRNA1P02708 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CHRNA1P02708 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC15.57■□□□□ 0.08
CHRNA1P02708 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 AC021305.1-201ENST00000520656 1514 ntBASIC15.57■□□□□ 0.08
CHRNA1P02708 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRNA1P02708 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CHRNA1P02708 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CHRNA1P02708 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 RNVU1-8-201ENST00000364272 125 ntBASIC15.56■□□□□ 0.08
CHRNA1P02708 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 LINC00265-2P-201ENST00000413372 782 ntBASIC15.56■□□□□ 0.08
CHRNA1P02708 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC15.56■□□□□ 0.08
CHRNA1P02708 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.56■□□□□ 0.08
CHRNA1P02708 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 AC226150.1-201ENST00000544259 466 ntBASIC15.56■□□□□ 0.08
CHRNA1P02708 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 AC145285.5-201ENST00000562217 361 ntBASIC15.56■□□□□ 0.08
CHRNA1P02708 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC15.56■□□□□ 0.08
CHRNA1P02708 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CHRNA1P02708 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC15.56■□□□□ 0.08
CHRNA1P02708 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 AC007952.5-201ENST00000572818 1486 ntBASIC15.56■□□□□ 0.08
CHRNA1P02708 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHRNA1P02708 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CHRNA1P02708 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRNA1P02708 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 KRT8P18-201ENST00000413425 1445 ntBASIC15.55■□□□□ 0.08
CHRNA1P02708 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 AC093909.3-201ENST00000504783 336 ntBASIC15.55■□□□□ 0.08
CHRNA1P02708 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 AL512310.5-201ENST00000551999 515 ntBASIC15.55■□□□□ 0.08
CHRNA1P02708 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.55■□□□□ 0.08
CHRNA1P02708 KRT8P2-201ENST00000556193 944 ntBASIC15.55■□□□□ 0.08
CHRNA1P02708 RN7SL455P-201ENST00000580629 282 ntBASIC15.55■□□□□ 0.08
CHRNA1P02708 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 NAMA-206ENST00000605377 509 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 AL451007.2-201ENST00000632004 563 ntBASIC15.55■□□□□ 0.08
CHRNA1P02708 AC068587.6-202ENST00000641839 5619 ntBASIC15.55■□□□□ 0.08
CHRNA1P02708 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRNA1P02708 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRNA1P02708 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRNA1P02708 NFIC-211ENST00000641145 8399 ntBASIC15.55■□□□□ 0.08
CHRNA1P02708 RN7SL832P-201ENST00000607781 1756 ntBASIC15.54■□□□□ 0.08
CHRNA1P02708 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms