Protein–RNA interactions for Protein: O00634

NTN3, Netrin-3, humanhuman

Predicted RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NTN3O00634 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.47□□□□□ -0.25
NTN3O00634 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC13.47□□□□□ -0.25
NTN3O00634 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
NTN3O00634 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
NTN3O00634 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
NTN3O00634 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.47□□□□□ -0.25
NTN3O00634 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
NTN3O00634 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NTN3O00634 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.47□□□□□ -0.25
NTN3O00634 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.47□□□□□ -0.25
NTN3O00634 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.46□□□□□ -0.25
NTN3O00634 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NTN3O00634 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.46□□□□□ -0.25
NTN3O00634 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
NTN3O00634 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.46□□□□□ -0.25
NTN3O00634 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.46□□□□□ -0.25
NTN3O00634 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
NTN3O00634 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.46□□□□□ -0.25
NTN3O00634 AP000354.1-201ENST00000396982 456 ntBASIC13.46□□□□□ -0.25
NTN3O00634 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC13.46□□□□□ -0.25
NTN3O00634 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.46□□□□□ -0.25
NTN3O00634 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC13.46□□□□□ -0.25
NTN3O00634 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.46□□□□□ -0.25
NTN3O00634 BPIFB5P-201ENST00000457066 1099 ntBASIC13.46□□□□□ -0.25
NTN3O00634 AC093300.1-201ENST00000510368 1201 ntBASIC13.46□□□□□ -0.25
NTN3O00634 AC100858.1-201ENST00000514059 1228 ntBASIC13.46□□□□□ -0.25
NTN3O00634 KRT18P37-201ENST00000520711 1282 ntBASIC13.46□□□□□ -0.25
NTN3O00634 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NTN3O00634 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.46□□□□□ -0.25
NTN3O00634 CES1P2-201ENST00000566467 1242 ntBASIC13.46□□□□□ -0.25
NTN3O00634 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC13.46□□□□□ -0.25
NTN3O00634 CYP4F36P-201ENST00000589193 186 ntBASIC13.46□□□□□ -0.25
NTN3O00634 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.46□□□□□ -0.25
NTN3O00634 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.46□□□□□ -0.25
NTN3O00634 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
NTN3O00634 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.46□□□□□ -0.25
NTN3O00634 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NTN3O00634 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NTN3O00634 AC117503.4-201ENST00000623229 1418 ntBASIC13.46□□□□□ -0.26
NTN3O00634 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NTN3O00634 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NTN3O00634 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NTN3O00634 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.46□□□□□ -0.26
NTN3O00634 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
NTN3O00634 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.46□□□□□ -0.26
NTN3O00634 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NTN3O00634 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NTN3O00634 GOLGA8UP-201ENST00000527159 1755 ntBASIC13.45□□□□□ -0.26
NTN3O00634 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NTN3O00634 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.45□□□□□ -0.26
NTN3O00634 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NTN3O00634 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.45□□□□□ -0.26
NTN3O00634 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.45□□□□□ -0.26
NTN3O00634 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NTN3O00634 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NTN3O00634 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.45□□□□□ -0.26
NTN3O00634 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.45□□□□□ -0.26
NTN3O00634 MIR1301-201ENST00000408518 82 ntBASIC13.45□□□□□ -0.26
NTN3O00634 OR51A9P-201ENST00000422578 911 ntBASIC13.45□□□□□ -0.26
NTN3O00634 PSAT1P2-201ENST00000426107 972 ntBASIC13.45□□□□□ -0.26
NTN3O00634 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.45□□□□□ -0.26
NTN3O00634 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.45□□□□□ -0.26
NTN3O00634 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NTN3O00634 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.45□□□□□ -0.26
NTN3O00634 AC012158.2-201ENST00000536546 354 ntBASIC13.45□□□□□ -0.26
NTN3O00634 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 AP005212.2-201ENST00000584979 510 ntBASIC13.45□□□□□ -0.26
NTN3O00634 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NTN3O00634 PEBP1P2-201ENST00000603980 558 ntBASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms