Protein–RNA interactions for Protein: A6NCL1

GMNC, Geminin coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMNCA6NCL1 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GMNCA6NCL1 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
GMNCA6NCL1 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMNCA6NCL1 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMNCA6NCL1 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
GMNCA6NCL1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
GMNCA6NCL1 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 SLC25A1P1-201ENST00000528351 927 ntBASIC14.51□□□□□ -0.09
GMNCA6NCL1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 PCDHB17P-202ENST00000623466 3066 ntBASIC14.51□□□□□ -0.09
GMNCA6NCL1 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 AC008620.2-201ENST00000510294 1569 ntBASIC14.51□□□□□ -0.09
GMNCA6NCL1 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 C2-209ENST00000452323 1999 ntTSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GMNCA6NCL1 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GMNCA6NCL1 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 AL138799.1-201ENST00000448213 1675 ntBASIC14.5□□□□□ -0.09
GMNCA6NCL1 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 AC003958.1-201ENST00000435883 421 ntBASIC14.5□□□□□ -0.09
GMNCA6NCL1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 AC138761.1-201ENST00000584393 385 ntBASIC14.5□□□□□ -0.09
GMNCA6NCL1 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.5□□□□□ -0.09
GMNCA6NCL1 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
GMNCA6NCL1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms