Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 AL391069.4-201ENST00000609583 481 ntBASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 SPDYE12P-201ENST00000618416 771 ntBASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 PRSS30P-206ENST00000641773 873 ntBASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RCL1Q9Y2P8 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 CSPG4P11-201ENST00000560634 4910 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 PTPRVP-205ENST00000641549 5067 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AL139094.1-201ENST00000405549 1188 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 NUS1P3-201ENST00000423502 862 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AC026410.3-201ENST00000514280 936 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AC092337.1-201ENST00000568699 1129 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 BX640515.1-201ENST00000617215 977 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 AP001059.3-201ENST00000619053 235 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 LINC02486-201ENST00000604157 3000 ntBASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RCL1Q9Y2P8 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.9□□□□□ -0.51
RCL1Q9Y2P8 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RCL1Q9Y2P8 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.9□□□□□ -0.51
RCL1Q9Y2P8 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RCL1Q9Y2P8 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
RCL1Q9Y2P8 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RCL1Q9Y2P8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
RCL1Q9Y2P8 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RCL1Q9Y2P8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms