Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AL354702.1-201ENST00000442006 1960 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AC092580.1-201ENST00000433998 658 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 CHCHD2P9-201ENST00000461726 456 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AC130709.1-201ENST00000484779 1212 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 KRT8P1-201ENST00000557533 1207 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 NPM1P43-201ENST00000558669 786 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AC135983.4-201ENST00000564116 1262 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 MIR4522-201ENST00000584932 87 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 RN7SL736P-201ENST00000613111 269 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AC009560.1-201ENST00000620208 434 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AC090386.2-201ENST00000623010 1039 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 MYADML-201ENST00000474610 2147 ntBASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.97□□□□□ -0.17
LRIT1Q9P2V4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 RPSAP31-201ENST00000416648 895 ntBASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 AC079112.1-201ENST00000454972 939 ntBASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 FTH1P22-201ENST00000456305 520 ntBASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 SORD2P-201ENST00000558556 1069 ntBASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 AC087392.5-201ENST00000612517 489 ntBASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 MIR6842-201ENST00000612539 65 ntBASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 AP003419.4-201ENST00000616071 517 ntBASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LRIT1Q9P2V4 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRIT1Q9P2V4 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms