Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 KLF2P2-201ENST00000416807 1039 ntBASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 KRT43P-201ENST00000434019 910 ntBASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 AC233724.13-201ENST00000598383 410 ntBASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 AL022328.1-201ENST00000610050 478 ntBASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LIN7CQ9NUP9 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 AC015818.8-201ENST00000587907 1519 ntBASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 CICP17-201ENST00000418553 2377 ntBASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 AC004945.1-201ENST00000416738 983 ntBASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 AC008735.3-201ENST00000596646 500 ntBASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 RPSAP52-203ENST00000622976 1023 ntBASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 TCAF1P1-201ENST00000414990 2232 ntBASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIN7CQ9NUP9 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms