Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AC100850.1-201ENST00000506768 649 ntBASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AC044849.1-201ENST00000519737 1188 ntBASIC13.2□□□□□ -0.3
LRRC46Q96FV0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AP001505.2-201ENST00000616815 443 ntBASIC13.2□□□□□ -0.3
LRRC46Q96FV0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRRC46Q96FV0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 RN7SL720P-201ENST00000488178 304 ntBASIC13.19□□□□□ -0.3
LRRC46Q96FV0 SUPT4H1P2-201ENST00000501248 353 ntBASIC13.19□□□□□ -0.3
LRRC46Q96FV0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRRC46Q96FV0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms