Protein–RNA interactions for Protein: Q8TC41

RNF217, Probable E3 ubiquitin-protein ligase RNF217, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF217Q8TC41 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 PMS2P2-201ENST00000425039 1128 ntBASIC14.17□□□□□ -0.14
RNF217Q8TC41 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 AC067863.1-201ENST00000494933 530 ntBASIC14.17□□□□□ -0.14
RNF217Q8TC41 SDHAP3-202ENST00000515467 728 ntBASIC14.17□□□□□ -0.14
RNF217Q8TC41 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 AC140878.1-201ENST00000565277 250 ntBASIC14.17□□□□□ -0.14
RNF217Q8TC41 MIR3908-201ENST00000579798 126 ntBASIC14.17□□□□□ -0.14
RNF217Q8TC41 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 CCNG1-201ENST00000340828 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 TUSC5-201ENST00000333813 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF217Q8TC41 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF217Q8TC41 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 AL133267.1-201ENST00000398220 340 ntBASIC14.16□□□□□ -0.14
RNF217Q8TC41 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 MIR943-201ENST00000401286 94 ntBASIC14.16□□□□□ -0.14
RNF217Q8TC41 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 KRT18P43-201ENST00000469825 1281 ntBASIC14.16□□□□□ -0.14
RNF217Q8TC41 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 AC044860.1-202ENST00000559481 777 ntBASIC14.16□□□□□ -0.14
RNF217Q8TC41 AC010336.2-201ENST00000564226 506 ntBASIC14.16□□□□□ -0.14
RNF217Q8TC41 RN7SL121P-201ENST00000584223 273 ntBASIC14.16□□□□□ -0.14
RNF217Q8TC41 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF217Q8TC41 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF217Q8TC41 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF217Q8TC41 AL121723.1-201ENST00000445194 1519 ntBASIC14.15□□□□□ -0.14
RNF217Q8TC41 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.15□□□□□ -0.14
RNF217Q8TC41 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RNF217Q8TC41 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.15□□□□□ -0.14
RNF217Q8TC41 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RNF217Q8TC41 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RNF217Q8TC41 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms