Protein–RNA interactions for Protein: Q8TB73

NDNF, Protein NDNF, humanhuman

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNFQ8TB73 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.13□□□□□ -0.31
NDNFQ8TB73 KRT8P35-201ENST00000483942 1338 ntBASIC13.13□□□□□ -0.31
NDNFQ8TB73 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
NDNFQ8TB73 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 AL021155.1-201ENST00000438808 2637 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 AL035456.1-201ENST00000456064 1369 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 LINC02486-201ENST00000604157 3000 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 AC107890.1-201ENST00000422478 521 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 KLF2P3-201ENST00000451977 1087 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 IGHV3-42-201ENST00000520410 361 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 BANF1P1-201ENST00000553684 263 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 AC105021.1-202ENST00000570572 669 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 AC092364.2-202ENST00000597012 1073 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 Z98257.2-202ENST00000641138 1548 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 TNRC18P1-201ENST00000502875 3650 ntBASIC13.12□□□□□ -0.31
NDNFQ8TB73 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NDNFQ8TB73 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NDNFQ8TB73 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 AC022400.8-201ENST00000623453 3599 ntBASIC13.11□□□□□ -0.31
NDNFQ8TB73 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NDNFQ8TB73 AL391647.1-201ENST00000395664 511 ntBASIC13.11□□□□□ -0.31
NDNFQ8TB73 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.11□□□□□ -0.31
NDNFQ8TB73 SPDYE17-201ENST00000412399 783 ntBASIC13.11□□□□□ -0.31
NDNFQ8TB73 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 AC004066.1-201ENST00000502488 802 ntBASIC13.11□□□□□ -0.31
NDNFQ8TB73 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.11□□□□□ -0.31
NDNFQ8TB73 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms