Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 TNN-202ENST00000621086 4234 ntTSL 5 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 AL928654.5-201ENST00000624831 2501 ntBASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC14.4□□□□□ -0.1
RFWD2Q8NHY2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 NUS1P3-201ENST00000423502 862 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 AC055876.3-201ENST00000431496 288 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 AL589987.1-201ENST00000453380 819 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 MEIS3P1-201ENST00000495167 958 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 AL049840.4-201ENST00000602422 811 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 AL844908.2-201ENST00000609461 460 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 AC138649.4-201ENST00000612222 287 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 AC087499.5-201ENST00000452760 1342 ntBASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFWD2Q8NHY2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 VDAC1P7-201ENST00000462417 847 ntBASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.38□□□□□ -0.11
RFWD2Q8NHY2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms