Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 AGAP7P-201ENST00000582299 2062 ntBASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC023157.3-201ENST00000619086 2088 ntBASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AGAP14-201ENST00000624701 2060 ntBASIC15.31■□□□□ 0.04
TTC16Q8NEE8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 PUDPP3-201ENST00000445368 636 ntBASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 MARK2P5-201ENST00000507649 634 ntBASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 MIR3619-201ENST00000579667 83 ntBASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC005324.6-201ENST00000587972 613 ntBASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC100757.4-201ENST00000626934 759 ntBASIC15.31■□□□□ 0.04
TTC16Q8NEE8 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TTC16Q8NEE8 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 RN7SKP214-201ENST00000364208 315 ntBASIC15.3■□□□□ 0.04
TTC16Q8NEE8 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 HINT2P1-201ENST00000419438 481 ntBASIC15.3■□□□□ 0.04
TTC16Q8NEE8 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 FAM58BP-201ENST00000439056 645 ntBASIC15.3■□□□□ 0.04
TTC16Q8NEE8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 SNORD3B-2-202ENST00000571722 791 ntBASIC15.3■□□□□ 0.04
TTC16Q8NEE8 RN7SL574P-201ENST00000581512 297 ntBASIC15.3■□□□□ 0.04
TTC16Q8NEE8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 LINC01101-201ENST00000622953 1884 ntBASIC15.3■□□□□ 0.04
TTC16Q8NEE8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.3■□□□□ 0.04
TTC16Q8NEE8 AC018529.2-202ENST00000611482 3087 ntBASIC15.3■□□□□ 0.04
TTC16Q8NEE8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms