Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MIR6720-201ENST00000611664 98 ntBASIC14.12□□□□□ -0.15
YBX1P67809 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
YBX1P67809 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
YBX1P67809 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.12□□□□□ -0.15
YBX1P67809 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.12□□□□□ -0.15
YBX1P67809 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
YBX1P67809 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 AC005562.1-201ENST00000583030 3219 ntBASIC14.11□□□□□ -0.15
YBX1P67809 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
YBX1P67809 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.11□□□□□ -0.15
YBX1P67809 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.11□□□□□ -0.15
YBX1P67809 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
YBX1P67809 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
YBX1P67809 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
YBX1P67809 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.11□□□□□ -0.15
YBX1P67809 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.11□□□□□ -0.15
YBX1P67809 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.11□□□□□ -0.15
YBX1P67809 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.11□□□□□ -0.15
YBX1P67809 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.11□□□□□ -0.15
YBX1P67809 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.11□□□□□ -0.15
YBX1P67809 MIR6869-201ENST00000619434 62 ntBASIC14.11□□□□□ -0.15
YBX1P67809 AC022748.3-201ENST00000621828 275 ntBASIC14.11□□□□□ -0.15
YBX1P67809 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.11□□□□□ -0.15
YBX1P67809 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.11□□□□□ -0.15
YBX1P67809 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.11□□□□□ -0.15
YBX1P67809 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
YBX1P67809 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
YBX1P67809 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
YBX1P67809 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.11□□□□□ -0.15
YBX1P67809 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.1□□□□□ -0.15
YBX1P67809 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 CYP4F23P-201ENST00000593402 1579 ntBASIC14.1□□□□□ -0.15
YBX1P67809 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.1□□□□□ -0.15
YBX1P67809 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
YBX1P67809 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.1□□□□□ -0.15
YBX1P67809 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.1□□□□□ -0.15
YBX1P67809 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
YBX1P67809 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.1□□□□□ -0.15
YBX1P67809 RPL18P13-201ENST00000478088 569 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms