Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN20P56880 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.36□□□□□ -0.27
CLDN20P56880 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN20P56880 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 GCOM2-201ENST00000509133 1104 ntBASIC13.36□□□□□ -0.27
CLDN20P56880 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.36□□□□□ -0.27
CLDN20P56880 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.36□□□□□ -0.27
CLDN20P56880 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN20P56880 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.36□□□□□ -0.27
CLDN20P56880 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDN20P56880 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.36□□□□□ -0.27
CLDN20P56880 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CLDN20P56880 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDN20P56880 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDN20P56880 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN20P56880 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CLDN20P56880 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.35□□□□□ -0.27
CLDN20P56880 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLDN20P56880 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.35□□□□□ -0.27
CLDN20P56880 HSPB1P2-201ENST00000448722 546 ntBASIC13.35□□□□□ -0.27
CLDN20P56880 AL591846.1-201ENST00000451736 433 ntBASIC13.35□□□□□ -0.27
CLDN20P56880 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN20P56880 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.35□□□□□ -0.27
CLDN20P56880 AC104982.3-201ENST00000581995 514 ntBASIC13.35□□□□□ -0.27
CLDN20P56880 AC005695.3-201ENST00000614522 232 ntBASIC13.35□□□□□ -0.27
CLDN20P56880 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.35□□□□□ -0.27
CLDN20P56880 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
CLDN20P56880 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
CLDN20P56880 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.35□□□□□ -0.27
CLDN20P56880 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLDN20P56880 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
CLDN20P56880 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms