Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 STRADA-247ENST00000640679 1816 ntTSL 5 BASIC9.38□□□□□ -0.91
PCP4P48539 YY1AP1-202ENST00000311573 2682 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
PCP4P48539 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
PCP4P48539 NLRP7-202ENST00000340844 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 RFC3-201ENST00000380071 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 SLC22A8-202ENST00000336232 2178 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 GUCY1A3-208ENST00000511507 2552 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 HUWE1-202ENST00000262854 14739 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 KLHL18-201ENST00000232766 4620 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 TXNRD1-206ENST00000524698 1933 ntAPPRIS P2 TSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 DHX35-202ENST00000373323 2347 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 GGCX-205ENST00000430215 2314 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 POU6F1-202ENST00000389243 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC9.37□□□□□ -0.91
PCP4P48539 SLC4A9-204ENST00000506757 3277 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
PCP4P48539 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 AC138904.1-201ENST00000501520 2481 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 MAPK10-361ENST00000641862 2462 ntBASIC9.37□□□□□ -0.91
PCP4P48539 CCDC112-202ENST00000395557 2069 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 AC008132.1-201ENST00000419447 2068 ntTSL 5 BASIC9.37□□□□□ -0.91
PCP4P48539 LMO3-215ENST00000537304 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC9.37□□□□□ -0.91
PCP4P48539 AL645939.2-201ENST00000427340 991 ntBASIC9.37□□□□□ -0.91
PCP4P48539 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 AC093536.1-201ENST00000569153 554 ntBASIC9.37□□□□□ -0.91
PCP4P48539 KLF16-203ENST00000592313 508 ntTSL 3 BASIC9.37□□□□□ -0.91
PCP4P48539 AC008175.2-201ENST00000612840 297 ntBASIC9.37□□□□□ -0.91
PCP4P48539 MROH7-203ENST00000395690 3413 ntTSL 5 BASIC9.37□□□□□ -0.91
PCP4P48539 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 PAMR1-206ENST00000615849 2801 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 AC026369.1-202ENST00000508953 4913 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 PTCHD1-201ENST00000379361 13714 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 MEP1A-202ENST00000611727 2971 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 LINC01345-203ENST00000635247 1646 ntTSL 5 BASIC9.37□□□□□ -0.91
PCP4P48539 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 RAI2-202ENST00000360011 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 KRT8P3-201ENST00000519669 1449 ntBASIC9.37□□□□□ -0.91
PCP4P48539 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 SIGLEC16-201ENST00000599858 1437 ntBASIC9.37□□□□□ -0.91
PCP4P48539 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 ODF2-201ENST00000351030 3899 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 AL354702.1-201ENST00000442006 1960 ntBASIC9.37□□□□□ -0.91
PCP4P48539 ATP6V1H-207ENST00000520188 1967 ntTSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 CA8-201ENST00000317995 3812 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC9.37□□□□□ -0.91
PCP4P48539 DSG4-202ENST00000359747 4526 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 SCN5A-203ENST00000413689 8504 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
PCP4P48539 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC9.37□□□□□ -0.91
PCP4P48539 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
PCP4P48539 RPS6KA2-203ENST00000405189 2282 ntTSL 2 BASIC9.36□□□□□ -0.91
PCP4P48539 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 AC131009.4-201ENST00000624048 1740 ntBASIC9.36□□□□□ -0.91
PCP4P48539 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC9.36□□□□□ -0.91
PCP4P48539 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC9.36□□□□□ -0.91
PCP4P48539 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC9.36□□□□□ -0.91
PCP4P48539 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC9.36□□□□□ -0.91
PCP4P48539 SERINC1-201ENST00000339697 3137 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 RFX2-201ENST00000303657 3993 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 CDH11-212ENST00000566827 2395 ntTSL 2 BASIC9.36□□□□□ -0.91
PCP4P48539 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 GPRASP2-205ENST00000543253 3935 ntAPPRIS P1 TSL 4 BASIC9.36□□□□□ -0.91
PCP4P48539 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC9.36□□□□□ -0.91
PCP4P48539 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 KRT87P-202ENST00000534226 1464 ntBASIC9.36□□□□□ -0.91
PCP4P48539 LINC01140-206ENST00000484933 3368 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 AL137786.1-201ENST00000553378 3030 ntBASIC9.36□□□□□ -0.91
PCP4P48539 LIN28A-202ENST00000326279 4008 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC9.36□□□□□ -0.91
PCP4P48539 CABLES1-203ENST00000420687 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC9.36□□□□□ -0.91
PCP4P48539 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC9.36□□□□□ -0.91
PCP4P48539 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 B3GALT5-201ENST00000343118 2606 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
PCP4P48539 TP53-218ENST00000610292 2639 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 ERG-203ENST00000398905 4806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PCP4P48539 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms