RNA–Protein interactions for RNA: ENST00000303657.9

RFX2-201, Transcript of regulatory factor X2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RFX2, Length 3,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-201ENST00000303657 NISCHQ9Y2I1 1504 aa21.32■■□□□ 1
RFX2-201ENST00000303657 DCAF8L2P0C7V8 631 aa19.21■□□□□ 0.67
RFX2-201ENST00000303657 SHROOM4Q9ULL8 1493 aa18.94■□□□□ 0.62
RFX2-201ENST00000303657 SUPT5HO00267 1087 aaKnown RBP18.61■□□□□ 0.57
RFX2-201ENST00000303657 ZCCHC6Q5VYS8 1495 aaKnown RBP17.86■□□□□ 0.45
RFX2-201ENST00000303657 CCDC180Q9P1Z9 1646 aa17.82■□□□□ 0.44
RFX2-201ENST00000303657 ABCC9O60706 1549 aa17.65■□□□□ 0.42
RFX2-201ENST00000303657 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
RFX2-201ENST00000303657 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
RFX2-201ENST00000303657 CHIC1Q5VXU3 224 aa17.47■□□□□ 0.39
RFX2-201ENST00000303657 HRCP23327 699 aa17.44■□□□□ 0.38
RFX2-201ENST00000303657 PPARGC1BQ86YN6 1023 aaKnown RBP17.44■□□□□ 0.38
RFX2-201ENST00000303657 FAM9AQ8IZU1 332 aaPredicted RBP17.35■□□□□ 0.37
RFX2-201ENST00000303657 SCRIBQ14160 1630 aa17.28■□□□□ 0.36
RFX2-201ENST00000303657 LOC105371045A0A1W2PR82 267 aa17.24■□□□□ 0.35
RFX2-201ENST00000303657 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
RFX2-201ENST00000303657 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
RFX2-201ENST00000303657 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
RFX2-201ENST00000303657 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.31
RFX2-201ENST00000303657 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
RFX2-201ENST00000303657 RSF1Q96T23 1441 aaPredicted RBP16.94■□□□□ 0.3
RFX2-201ENST00000303657 CECR2Q9BXF3 1484 aa16.87■□□□□ 0.29
RFX2-201ENST00000303657 NACADO15069 1562 aa16.82■□□□□ 0.28
RFX2-201ENST00000303657 TTBK1Q5TCY1 1321 aaPredicted RBP16.81■□□□□ 0.28
RFX2-201ENST00000303657 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
RFX2-201ENST00000303657 RANGAP1P46060 587 aaPredicted RBP16.67■□□□□ 0.26
RFX2-201ENST00000303657 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
RFX2-201ENST00000303657 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
RFX2-201ENST00000303657 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
RFX2-201ENST00000303657 TRIM26Q12899 539 aaPredicted RBP16.54■□□□□ 0.24
RFX2-201ENST00000303657 WIZO95785 1651 aa16.5■□□□□ 0.23
RFX2-201ENST00000303657 BAZ1AQ9NRL2 1556 aaPredicted RBP16.42■□□□□ 0.22
RFX2-201ENST00000303657 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
RFX2-201ENST00000303657 MYT1Q01538 1121 aa16.33■□□□□ 0.2
RFX2-201ENST00000303657 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
RFX2-201ENST00000303657 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
RFX2-201ENST00000303657 YTHDC1Q96MU7 727 aaKnown RBP16.28■□□□□ 0.2
RFX2-201ENST00000303657 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.19
RFX2-201ENST00000303657 CSRNP3Q8WYN3 585 aa16.27■□□□□ 0.19
RFX2-201ENST00000303657 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
RFX2-201ENST00000303657 APLP2Q06481 763 aa16.25■□□□□ 0.19
RFX2-201ENST00000303657 NEUROD1Q13562 356 aa16.25■□□□□ 0.19
RFX2-201ENST00000303657 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
RFX2-201ENST00000303657 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
RFX2-201ENST00000303657 SMARCA4P51532 1647 aa16.21■□□□□ 0.19
RFX2-201ENST00000303657 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
RFX2-201ENST00000303657 SOGA1O94964 1423 aa16.16■□□□□ 0.18
RFX2-201ENST00000303657 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
RFX2-201ENST00000303657 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
RFX2-201ENST00000303657 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
RFX2-201ENST00000303657 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.17
RFX2-201ENST00000303657 HNRNPUL2Q1KMD3 747 aaKnown RBP16.08■□□□□ 0.17
RFX2-201ENST00000303657 DIEXFQ68CQ4 756 aaKnown RBP16.07■□□□□ 0.16
RFX2-201ENST00000303657 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
RFX2-201ENST00000303657 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
RFX2-201ENST00000303657 ATAD2BQ9ULI0 1458 aa16.04■□□□□ 0.16
RFX2-201ENST00000303657 RUSC2Q8N2Y8 1516 aa16.03■□□□□ 0.16
RFX2-201ENST00000303657 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
RFX2-201ENST00000303657 CEP162Q5TB80 1403 aa15.97■□□□□ 0.15
RFX2-201ENST00000303657 ITGAEP38570 1179 aa15.94■□□□□ 0.14
RFX2-201ENST00000303657 P3H3Q8IVL6 736 aa15.87■□□□□ 0.13
RFX2-201ENST00000303657 TNIKQ9UKE5 1360 aa15.86■□□□□ 0.13
RFX2-201ENST00000303657 GOLGA3Q08378 1498 aa15.83■□□□□ 0.12
RFX2-201ENST00000303657 CLIP1P30622 1438 aa15.82■□□□□ 0.12
RFX2-201ENST00000303657 EEA1Q15075 1411 aa15.82■□□□□ 0.12
RFX2-201ENST00000303657 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
RFX2-201ENST00000303657 CEP164Q9UPV0 1460 aa15.74■□□□□ 0.11
RFX2-201ENST00000303657 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
RFX2-201ENST00000303657 RAPGEF2Q9Y4G8 1499 aa15.71■□□□□ 0.11
RFX2-201ENST00000303657 NCAPD3P42695 1498 aa15.67■□□□□ 0.1
RFX2-201ENST00000303657 KIF27Q86VH2 1401 aa15.66■□□□□ 0.1
RFX2-201ENST00000303657 FAM50AQ14320 339 aaKnown RBP15.63■□□□□ 0.09
RFX2-201ENST00000303657 ARID3CA6NKF2 412 aa15.62■□□□□ 0.09
RFX2-201ENST00000303657 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
RFX2-201ENST00000303657 FBLN2P98095 1184 aa15.62■□□□□ 0.09
RFX2-201ENST00000303657 CUX2O14529 1486 aa15.62■□□□□ 0.09
RFX2-201ENST00000303657 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
RFX2-201ENST00000303657 PEG3Q9GZU2 1588 aa15.61■□□□□ 0.09
RFX2-201ENST00000303657 ZNF316A6NFI3 1004 aaPredicted RBP15.6■□□□□ 0.09
RFX2-201ENST00000303657 MIER1Q8N108 512 aa15.59■□□□□ 0.09
RFX2-201ENST00000303657 KANK4Q5T7N3 995 aaPredicted RBP15.59■□□□□ 0.09
RFX2-201ENST00000303657 VPS8Q8N3P4 1428 aa15.53■□□□□ 0.08
RFX2-201ENST00000303657 BCANQ96GW7 911 aa15.53■□□□□ 0.08
RFX2-201ENST00000303657 CARMIL1Q5VZK9 1371 aa15.52■□□□□ 0.07
RFX2-201ENST00000303657 CFTRP13569 1480 aa15.5■□□□□ 0.07
RFX2-201ENST00000303657 CUX1P39880 1505 aa15.48■□□□□ 0.07
RFX2-201ENST00000303657 NESP48681 1621 aa15.48■□□□□ 0.07
RFX2-201ENST00000303657 BCL11AQ9H165 835 aa15.48■□□□□ 0.07
RFX2-201ENST00000303657 TDRD9Q8NDG6 1382 aaKnown RBP15.47■□□□□ 0.07
RFX2-201ENST00000303657 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
RFX2-201ENST00000303657 CC2D2AQ9P2K1 1620 aa15.46■□□□□ 0.07
RFX2-201ENST00000303657 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
RFX2-201ENST00000303657 IGF1RP08069 1367 aa15.43■□□□□ 0.06
RFX2-201ENST00000303657 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
RFX2-201ENST00000303657 RAD54L2Q9Y4B4 1467 aa15.42■□□□□ 0.06
RFX2-201ENST00000303657 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
RFX2-201ENST00000303657 KIF21BO75037 1637 aa15.37■□□□□ 0.05
RFX2-201ENST00000303657 ANP32EQ9BTT0 268 aa15.36■□□□□ 0.05
RFX2-201ENST00000303657 PRXQ9BXM0 1461 aa15.35■□□□□ 0.05
RFX2-201ENST00000303657 ARAP1Q96P48 1450 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms