Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HTTP42858 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.65■□□□□ 0.1
HTTP42858 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC15.65■□□□□ 0.1
HTTP42858 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC15.65■□□□□ 0.1
HTTP42858 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC15.65■□□□□ 0.1
HTTP42858 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC15.65■□□□□ 0.1
HTTP42858 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HTTP42858 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.65■□□□□ 0.1
HTTP42858 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
HTTP42858 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 AL121949.1-201ENST00000402043 968 ntBASIC15.64■□□□□ 0.09
HTTP42858 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC15.64■□□□□ 0.09
HTTP42858 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC15.64■□□□□ 0.09
HTTP42858 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
HTTP42858 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.64■□□□□ 0.09
HTTP42858 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.64■□□□□ 0.09
HTTP42858 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
HTTP42858 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.64■□□□□ 0.09
HTTP42858 AL109954.1-202ENST00000564051 2148 ntBASIC15.64■□□□□ 0.09
HTTP42858 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC15.64■□□□□ 0.09
HTTP42858 OR2W2P-201ENST00000406313 909 ntBASIC15.64■□□□□ 0.09
HTTP42858 RFNG-202ENST00000429557 994 ntTSL 5 BASIC15.64■□□□□ 0.09
HTTP42858 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC15.64■□□□□ 0.09
HTTP42858 SNX20-205ENST00000610485 557 ntTSL 5 BASIC15.64■□□□□ 0.09
HTTP42858 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
HTTP42858 PAX6-247ENST00000638965 979 ntTSL 5 BASIC15.64■□□□□ 0.09
HTTP42858 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 TMBIM7P-203ENST00000641617 1718 ntBASIC15.64■□□□□ 0.09
HTTP42858 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 AJ011931.1-201ENST00000618749 2492 ntBASIC15.64■□□□□ 0.09
HTTP42858 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
HTTP42858 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC15.63■□□□□ 0.09
HTTP42858 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
HTTP42858 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC15.63■□□□□ 0.09
HTTP42858 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.63■□□□□ 0.09
HTTP42858 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.63■□□□□ 0.09
HTTP42858 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 ACTBP14-201ENST00000411655 1089 ntBASIC15.63■□□□□ 0.09
HTTP42858 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.63■□□□□ 0.09
HTTP42858 AC009812.1-201ENST00000605948 1059 ntBASIC15.63■□□□□ 0.09
HTTP42858 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC15.63■□□□□ 0.09
HTTP42858 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC15.63■□□□□ 0.09
HTTP42858 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC15.63■□□□□ 0.09
HTTP42858 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.63■□□□□ 0.09
HTTP42858 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
HTTP42858 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 PGK1P2-201ENST00000431702 1214 ntBASIC15.63■□□□□ 0.09
HTTP42858 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC15.63■□□□□ 0.09
HTTP42858 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC15.63■□□□□ 0.09
HTTP42858 RNA5SP288-201ENST00000516075 93 ntBASIC15.63■□□□□ 0.09
HTTP42858 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC15.63■□□□□ 0.09
HTTP42858 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.63■□□□□ 0.09
HTTP42858 AC015818.3-201ENST00000583797 589 ntBASIC15.63■□□□□ 0.09
HTTP42858 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
HTTP42858 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
HTTP42858 AC097359.2-201ENST00000604992 2389 ntBASIC15.62■□□□□ 0.09
HTTP42858 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HTTP42858 FAM86FP-201ENST00000338711 969 ntBASIC15.62■□□□□ 0.09
HTTP42858 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC15.62■□□□□ 0.09
HTTP42858 IQCF4-203ENST00000428561 420 ntBASIC15.62■□□□□ 0.09
HTTP42858 RPL29P2-201ENST00000488409 460 ntBASIC15.62■□□□□ 0.09
HTTP42858 CD44-224ENST00000526669 870 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms