Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
CPS1P31327 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPS1P31327 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPS1P31327 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CPS1P31327 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPS1P31327 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPS1P31327 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPS1P31327 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPS1P31327 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPS1P31327 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 AC008741.2-201ENST00000612792 3115 ntBASIC19.8■□□□□ 0.76
CPS1P31327 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CPS1P31327 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC19.8■□□□□ 0.76
CPS1P31327 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC19.8■□□□□ 0.76
CPS1P31327 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC19.8■□□□□ 0.76
CPS1P31327 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC19.8■□□□□ 0.76
CPS1P31327 AL031673.1-201ENST00000611460 466 ntBASIC19.8■□□□□ 0.76
CPS1P31327 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPS1P31327 AC018529.2-202ENST00000611482 3087 ntBASIC19.8■□□□□ 0.76
CPS1P31327 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CPS1P31327 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC19.8■□□□□ 0.76
CPS1P31327 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC19.79■□□□□ 0.76
CPS1P31327 GOLGA8UP-201ENST00000527159 1755 ntBASIC19.79■□□□□ 0.76
CPS1P31327 AC232323.1-201ENST00000540724 2099 ntBASIC19.79■□□□□ 0.76
CPS1P31327 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.79■□□□□ 0.76
CPS1P31327 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
CPS1P31327 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 AC103592.1-201ENST00000394513 664 ntBASIC19.79■□□□□ 0.76
CPS1P31327 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC19.79■□□□□ 0.76
CPS1P31327 FAM187B2P-201ENST00000577135 713 ntBASIC19.79■□□□□ 0.76
CPS1P31327 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.79■□□□□ 0.76
CPS1P31327 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.79■□□□□ 0.76
CPS1P31327 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CPS1P31327 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPS1P31327 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CPS1P31327 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CPS1P31327 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CPS1P31327 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC19.78■□□□□ 0.76
CPS1P31327 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC19.78■□□□□ 0.76
CPS1P31327 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CPS1P31327 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CPS1P31327 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 U3.5-201ENST00000363448 216 ntBASIC19.78■□□□□ 0.76
CPS1P31327 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC19.78■□□□□ 0.76
CPS1P31327 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC19.78■□□□□ 0.76
CPS1P31327 CCNL2P1-201ENST00000512846 969 ntBASIC19.78■□□□□ 0.76
CPS1P31327 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC19.78■□□□□ 0.76
CPS1P31327 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC19.78■□□□□ 0.76
CPS1P31327 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
CPS1P31327 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC19.78■□□□□ 0.76
CPS1P31327 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CPS1P31327 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CPS1P31327 AC092115.1-201ENST00000566277 1402 ntBASIC19.78■□□□□ 0.76
CPS1P31327 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC19.78■□□□□ 0.76
CPS1P31327 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPS1P31327 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.78■□□□□ 0.76
CPS1P31327 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CPS1P31327 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CPS1P31327 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms