Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC14.37□□□□□ -0.11
GABRB3P28472 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.37□□□□□ -0.11
GABRB3P28472 AC079776.1-201ENST00000401540 1152 ntBASIC14.37□□□□□ -0.11
GABRB3P28472 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.37□□□□□ -0.11
GABRB3P28472 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.37□□□□□ -0.11
GABRB3P28472 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.37□□□□□ -0.11
GABRB3P28472 KRT17P8-201ENST00000540749 863 ntBASIC14.37□□□□□ -0.11
GABRB3P28472 SNX29P1-201ENST00000548357 1007 ntBASIC14.37□□□□□ -0.11
GABRB3P28472 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.37□□□□□ -0.11
GABRB3P28472 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.37□□□□□ -0.11
GABRB3P28472 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
GABRB3P28472 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GABRB3P28472 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GABRB3P28472 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.37□□□□□ -0.11
GABRB3P28472 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GABRB3P28472 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GABRB3P28472 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GABRB3P28472 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
GABRB3P28472 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
GABRB3P28472 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC14.37□□□□□ -0.11
GABRB3P28472 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GABRB3P28472 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
GABRB3P28472 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 KLF2P4-201ENST00000451959 1225 ntBASIC14.36□□□□□ -0.11
GABRB3P28472 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.36□□□□□ -0.11
GABRB3P28472 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.36□□□□□ -0.11
GABRB3P28472 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.36□□□□□ -0.11
GABRB3P28472 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 OR2I1P-209ENST00000641730 5365 ntBASIC14.36□□□□□ -0.11
GABRB3P28472 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GABRB3P28472 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC14.36□□□□□ -0.11
GABRB3P28472 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
GABRB3P28472 AL365181.3-201ENST00000605886 3222 ntBASIC14.36□□□□□ -0.11
GABRB3P28472 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRB3P28472 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
GABRB3P28472 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GABRB3P28472 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRB3P28472 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRB3P28472 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRB3P28472 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.35□□□□□ -0.11
GABRB3P28472 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GABRB3P28472 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms