Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TIMP1P01033 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TIMP1P01033 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.34■□□□□ 0.05
TIMP1P01033 DOC2GP-204ENST00000639052 2548 ntBASIC15.34■□□□□ 0.05
TIMP1P01033 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 AC103592.1-201ENST00000394513 664 ntBASIC15.34■□□□□ 0.05
TIMP1P01033 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.34■□□□□ 0.05
TIMP1P01033 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC15.34■□□□□ 0.05
TIMP1P01033 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.34■□□□□ 0.05
TIMP1P01033 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TIMP1P01033 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TIMP1P01033 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.34■□□□□ 0.05
TIMP1P01033 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TIMP1P01033 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
TIMP1P01033 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
TIMP1P01033 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TIMP1P01033 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TIMP1P01033 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC15.33■□□□□ 0.05
TIMP1P01033 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TIMP1P01033 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TIMP1P01033 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TIMP1P01033 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
TIMP1P01033 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TIMP1P01033 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC15.33■□□□□ 0.04
TIMP1P01033 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC15.33■□□□□ 0.04
TIMP1P01033 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC15.33■□□□□ 0.04
TIMP1P01033 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC15.33■□□□□ 0.04
TIMP1P01033 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
TIMP1P01033 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.33■□□□□ 0.04
TIMP1P01033 GOLGA2P8-201ENST00000505201 779 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC15.33■□□□□ 0.04
TIMP1P01033 AC120498.7-201ENST00000562876 330 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 AC091304.3-201ENST00000566500 716 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 RN7SL602P-201ENST00000578326 324 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 RN7SL718P-201ENST00000581254 303 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC15.33■□□□□ 0.04
TIMP1P01033 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TIMP1P01033 AC110057.1-201ENST00000636031 898 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TIMP1P01033 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.33■□□□□ 0.04
TIMP1P01033 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 AC020931.1-201ENST00000589622 1346 ntBASIC15.33■□□□□ 0.04
TIMP1P01033 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TIMP1P01033 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
TIMP1P01033 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TIMP1P01033 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
TIMP1P01033 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TIMP1P01033 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC15.33■□□□□ 0.04
TIMP1P01033 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TIMP1P01033 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TIMP1P01033 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.32■□□□□ 0.04
TIMP1P01033 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.32■□□□□ 0.04
TIMP1P01033 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.32■□□□□ 0.04
TIMP1P01033 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TIMP1P01033 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TIMP1P01033 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TIMP1P01033 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms