Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 MIR5189-201ENST00000577370 114 ntBASIC13.71□□□□□ -0.21
CLIC1O00299 RN7SL204P-201ENST00000582831 262 ntBASIC13.71□□□□□ -0.21
CLIC1O00299 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.71□□□□□ -0.21
CLIC1O00299 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.71□□□□□ -0.21
CLIC1O00299 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.71□□□□□ -0.21
CLIC1O00299 AC002472.3-201ENST00000640124 621 ntBASIC13.71□□□□□ -0.21
CLIC1O00299 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLIC1O00299 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLIC1O00299 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLIC1O00299 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.71□□□□□ -0.21
CLIC1O00299 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLIC1O00299 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLIC1O00299 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLIC1O00299 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLIC1O00299 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.71□□□□□ -0.22
CLIC1O00299 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLIC1O00299 LINC02486-201ENST00000604157 3000 ntBASIC13.71□□□□□ -0.22
CLIC1O00299 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLIC1O00299 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLIC1O00299 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CLIC1O00299 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
CLIC1O00299 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.71□□□□□ -0.22
CLIC1O00299 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.71□□□□□ -0.22
CLIC1O00299 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
CLIC1O00299 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.7□□□□□ -0.22
CLIC1O00299 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLIC1O00299 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.7□□□□□ -0.22
CLIC1O00299 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.7□□□□□ -0.22
CLIC1O00299 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.7□□□□□ -0.22
CLIC1O00299 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.7□□□□□ -0.22
CLIC1O00299 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.7□□□□□ -0.22
CLIC1O00299 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.7□□□□□ -0.22
CLIC1O00299 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.7□□□□□ -0.22
CLIC1O00299 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 MEX3B-202ENST00000558133 4333 ntBASIC13.7□□□□□ -0.22
CLIC1O00299 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.7□□□□□ -0.22
CLIC1O00299 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CLIC1O00299 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.69□□□□□ -0.22
CLIC1O00299 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CLIC1O00299 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLIC1O00299 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLIC1O00299 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.69□□□□□ -0.22
CLIC1O00299 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLIC1O00299 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLIC1O00299 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CLIC1O00299 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.69□□□□□ -0.22
CLIC1O00299 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CLIC1O00299 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLIC1O00299 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.69□□□□□ -0.22
CLIC1O00299 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLIC1O00299 DGCR5-201ENST00000399539 862 ntBASIC13.69□□□□□ -0.22
CLIC1O00299 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms