Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 HECTD3-201ENST00000372168 2530 ntTSL 2 BASIC10.3□□□□□ -0.76
TMEM238C9JI98 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TMEM238C9JI98 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
TMEM238C9JI98 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC10.3□□□□□ -0.76
TMEM238C9JI98 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TMEM238C9JI98 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TMEM238C9JI98 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
TMEM238C9JI98 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.3□□□□□ -0.76
TMEM238C9JI98 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.3□□□□□ -0.76
TMEM238C9JI98 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.3□□□□□ -0.76
TMEM238C9JI98 LIMK1-201ENST00000336180 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 REXO1L4P-201ENST00000605109 1937 ntBASIC10.29□□□□□ -0.76
TMEM238C9JI98 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 AC004494.1-201ENST00000613210 2775 ntBASIC10.29□□□□□ -0.76
TMEM238C9JI98 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 FAM90A24P-201ENST00000520792 2369 ntBASIC10.29□□□□□ -0.76
TMEM238C9JI98 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 FOSB-206ENST00000586615 3774 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 C2-209ENST00000452323 1999 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 EMBP1-201ENST00000458200 901 ntBASIC10.29□□□□□ -0.76
TMEM238C9JI98 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 OR7E47P-204ENST00000575924 449 ntBASIC10.29□□□□□ -0.76
TMEM238C9JI98 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ACTL9-202ENST00000612068 1252 ntBASIC10.29□□□□□ -0.76
TMEM238C9JI98 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 AL162727.1-201ENST00000437712 3043 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 SHPRH-202ENST00000367503 5237 ntTSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
TMEM238C9JI98 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
TMEM238C9JI98 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM238C9JI98 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM238C9JI98 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC10.28□□□□□ -0.76
TMEM238C9JI98 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM238C9JI98 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM238C9JI98 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM238C9JI98 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM238C9JI98 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM238C9JI98 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
TMEM238C9JI98 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms