RNA–Protein interactions for RNA: ENST00000437712.1

AL162727.1-201, humanhuman

TSL 2 BASIC

Gene AL162727.1, Length 3,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL162727.1-201ENST00000437712 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
AL162727.1-201ENST00000437712 CCDC180Q9P1Z9 1646 aa20.05■□□□□ 0.8
AL162727.1-201ENST00000437712 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
AL162727.1-201ENST00000437712 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.76
AL162727.1-201ENST00000437712 HRCP23327 699 aa19.82■□□□□ 0.76
AL162727.1-201ENST00000437712 ABCC9O60706 1549 aa19.8■□□□□ 0.76
AL162727.1-201ENST00000437712 MYT1Q01538 1121 aa19.43■□□□□ 0.7
AL162727.1-201ENST00000437712 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
AL162727.1-201ENST00000437712 ZCCHC6Q5VYS8 1495 aaKnown RBP19.23■□□□□ 0.67
AL162727.1-201ENST00000437712 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
AL162727.1-201ENST00000437712 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
AL162727.1-201ENST00000437712 SHROOM4Q9ULL8 1493 aa19.06■□□□□ 0.64
AL162727.1-201ENST00000437712 NACADO15069 1562 aa18.88■□□□□ 0.61
AL162727.1-201ENST00000437712 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
AL162727.1-201ENST00000437712 DCAF1Q9Y4B6 1507 aa18.82■□□□□ 0.6
AL162727.1-201ENST00000437712 PABPN1Q86U42 306 aaKnown RBP eCLIP18.77■□□□□ 0.6
AL162727.1-201ENST00000437712 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
AL162727.1-201ENST00000437712 MYO15BQ96JP2 1530 aa18.7■□□□□ 0.58
AL162727.1-201ENST00000437712 UNC13AQ9UPW8 1703 aa18.44■□□□□ 0.54
AL162727.1-201ENST00000437712 SUPT5HO00267 1087 aaKnown RBP18.44■□□□□ 0.54
AL162727.1-201ENST00000437712 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
AL162727.1-201ENST00000437712 TTBK1Q5TCY1 1321 aaPredicted RBP18.41■□□□□ 0.54
AL162727.1-201ENST00000437712 ZEB1P37275 1124 aaPredicted RBP18.4■□□□□ 0.54
AL162727.1-201ENST00000437712 CHIC1Q5VXU3 224 aa18.37■□□□□ 0.53
AL162727.1-201ENST00000437712 NEUROD1Q13562 356 aa18.34■□□□□ 0.53
AL162727.1-201ENST00000437712 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
AL162727.1-201ENST00000437712 BICRAQ9NZM4 1560 aa18.31■□□□□ 0.52
AL162727.1-201ENST00000437712 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
AL162727.1-201ENST00000437712 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
AL162727.1-201ENST00000437712 CENPBP07199 599 aaPredicted RBP18.09■□□□□ 0.49
AL162727.1-201ENST00000437712 BCL11AQ9H165 835 aa18.09■□□□□ 0.49
AL162727.1-201ENST00000437712 LOC105371045A0A1W2PR82 267 aa18.01■□□□□ 0.47
AL162727.1-201ENST00000437712 FAM9AQ8IZU1 332 aaPredicted RBP17.94■□□□□ 0.46
AL162727.1-201ENST00000437712 DNAJC5BQ9UF47 199 aa17.92■□□□□ 0.46
AL162727.1-201ENST00000437712 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
AL162727.1-201ENST00000437712 EIF4G1Q04637 1599 aaKnown RBP17.85■□□□□ 0.45
AL162727.1-201ENST00000437712 RSF1Q96T23 1441 aaPredicted RBP17.83■□□□□ 0.45
AL162727.1-201ENST00000437712 PRKCSHP14314 528 aaPredicted RBP17.82■□□□□ 0.44
AL162727.1-201ENST00000437712 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
AL162727.1-201ENST00000437712 DIEXFQ68CQ4 756 aaKnown RBP17.78■□□□□ 0.44
AL162727.1-201ENST00000437712 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
AL162727.1-201ENST00000437712 WIZO95785 1651 aa17.74■□□□□ 0.43
AL162727.1-201ENST00000437712 CC2D2AQ9P2K1 1620 aa17.72■□□□□ 0.43
AL162727.1-201ENST00000437712 ANP32EQ9BTT0 268 aa17.72■□□□□ 0.43
AL162727.1-201ENST00000437712 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
AL162727.1-201ENST00000437712 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.4
AL162727.1-201ENST00000437712 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
AL162727.1-201ENST00000437712 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
AL162727.1-201ENST00000437712 SMARCA2P51531 1590 aa17.54■□□□□ 0.4
AL162727.1-201ENST00000437712 NCAPD3P42695 1498 aa17.49■□□□□ 0.39
AL162727.1-201ENST00000437712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
AL162727.1-201ENST00000437712 CCER1Q8TC90 406 aaPredicted RBP17.47■□□□□ 0.39
AL162727.1-201ENST00000437712 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
AL162727.1-201ENST00000437712 ERICH6Q7L0X2 663 aa17.42■□□□□ 0.38
AL162727.1-201ENST00000437712 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
AL162727.1-201ENST00000437712 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
AL162727.1-201ENST00000437712 TSHZ2Q9NRE2 1034 aa17.37■□□□□ 0.37
AL162727.1-201ENST00000437712 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
AL162727.1-201ENST00000437712 HMGXB3Q12766 1538 aa17.34■□□□□ 0.37
AL162727.1-201ENST00000437712 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
AL162727.1-201ENST00000437712 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
AL162727.1-201ENST00000437712 MIER1Q8N108 512 aa17.27■□□□□ 0.36
AL162727.1-201ENST00000437712 APLP2Q06481 763 aa17.24■□□□□ 0.35
AL162727.1-201ENST00000437712 NESP48681 1621 aa17.24■□□□□ 0.35
AL162727.1-201ENST00000437712 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
AL162727.1-201ENST00000437712 CADPSQ9ULU8 1353 aa17.13■□□□□ 0.33
AL162727.1-201ENST00000437712 CFTRP13569 1480 aa17.03■□□□□ 0.32
AL162727.1-201ENST00000437712 ERCC6Q03468 1493 aa17■□□□□ 0.31
AL162727.1-201ENST00000437712 EHMT2Q96KQ7 1210 aa16.99■□□□□ 0.31
AL162727.1-201ENST00000437712 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
AL162727.1-201ENST00000437712 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.3
AL162727.1-201ENST00000437712 PDS5BQ9NTI5 1447 aa16.94■□□□□ 0.3
AL162727.1-201ENST00000437712 LAMC3Q9Y6N6 1575 aa16.92■□□□□ 0.3
AL162727.1-201ENST00000437712 RBM19Q9Y4C8 960 aaKnown RBP16.91■□□□□ 0.3
AL162727.1-201ENST00000437712 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
AL162727.1-201ENST00000437712 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
AL162727.1-201ENST00000437712 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
AL162727.1-201ENST00000437712 WRNQ14191 1432 aaPredicted RBP eCLIP16.83■□□□□ 0.28
AL162727.1-201ENST00000437712 MSH5O43196 834 aa16.82■□□□□ 0.28
AL162727.1-201ENST00000437712 BCANQ96GW7 911 aa16.8■□□□□ 0.28
AL162727.1-201ENST00000437712 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
AL162727.1-201ENST00000437712 CUX1P39880 1505 aa16.72■□□□□ 0.27
AL162727.1-201ENST00000437712 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
AL162727.1-201ENST00000437712 MYT1LQ9UL68 1186 aa16.71■□□□□ 0.27
AL162727.1-201ENST00000437712 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
AL162727.1-201ENST00000437712 MRC2Q9UBG0 1479 aa16.7■□□□□ 0.26
AL162727.1-201ENST00000437712 DEKP35659 375 aaKnown RBP16.7■□□□□ 0.26
AL162727.1-201ENST00000437712 FKBP8Q14318 412 aa16.69■□□□□ 0.26
AL162727.1-201ENST00000437712 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
AL162727.1-201ENST00000437712 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
AL162727.1-201ENST00000437712 SALL2Q9Y467 1007 aaPredicted RBP16.66■□□□□ 0.26
AL162727.1-201ENST00000437712 FGD5Q6ZNL6 1462 aa16.65■□□□□ 0.26
AL162727.1-201ENST00000437712 SOGA1O94964 1423 aa16.62■□□□□ 0.25
AL162727.1-201ENST00000437712 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
AL162727.1-201ENST00000437712 FANCIQ9NVI1 1328 aa16.62■□□□□ 0.25
AL162727.1-201ENST00000437712 UBE2Q2Q8WVN8 375 aa16.61■□□□□ 0.25
AL162727.1-201ENST00000437712 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
AL162727.1-201ENST00000437712 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
AL162727.1-201ENST00000437712 TOP2BQ02880 1626 aa16.58■□□□□ 0.24
AL162727.1-201ENST00000437712 RUSC2Q8N2Y8 1516 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms