Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 ARSEP1-201ENST00000420443 635 ntBASIC13.33□□□□□ -0.28
SNX18Q96RF0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 AL162726.2-201ENST00000438986 1017 ntBASIC13.33□□□□□ -0.28
SNX18Q96RF0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 ELK1P1-201ENST00000485699 580 ntBASIC13.33□□□□□ -0.28
SNX18Q96RF0 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 AC131206.1-201ENST00000538078 1211 ntBASIC13.33□□□□□ -0.28
SNX18Q96RF0 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 CTBP2P3-201ENST00000585629 1255 ntBASIC13.33□□□□□ -0.28
SNX18Q96RF0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 AL138725.1-201ENST00000407347 1314 ntBASIC13.33□□□□□ -0.28
SNX18Q96RF0 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.33□□□□□ -0.28
SNX18Q96RF0 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SNX18Q96RF0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 AC090505.1-201ENST00000430515 1834 ntBASIC13.32□□□□□ -0.28
SNX18Q96RF0 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 TTTY23B-201ENST00000442790 549 ntBASIC13.32□□□□□ -0.28
SNX18Q96RF0 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 AC022137.2-201ENST00000503482 481 ntBASIC13.32□□□□□ -0.28
SNX18Q96RF0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.32□□□□□ -0.28
SNX18Q96RF0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 MRPL37P1-201ENST00000592451 1337 ntBASIC13.32□□□□□ -0.28
SNX18Q96RF0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SNX18Q96RF0 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.32□□□□□ -0.28
SNX18Q96RF0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms