Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 AP1B1-204ENST00000405198 3838 ntTSL 5 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 OR13I1P-201ENST00000609811 1264 ntBASIC8.65□□□□□ -1.02
SVIPQ8NHG7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 AC106886.3-201ENST00000621583 547 ntBASIC8.65□□□□□ -1.02
SVIPQ8NHG7 AC015813.7-201ENST00000623294 581 ntBASIC8.65□□□□□ -1.02
SVIPQ8NHG7 CLEC4M-205ENST00000394122 1898 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 INPP5B-203ENST00000373024 3060 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 MS4A15-202ENST00000405633 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 PEX5L-213ENST00000476138 2361 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
SVIPQ8NHG7 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 AL137186.2-201ENST00000397264 3486 ntTSL 3 BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 POC5-203ENST00000446329 1728 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 TYK2-201ENST00000264818 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 TOMM20-201ENST00000366607 3387 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 LINC01140-206ENST00000484933 3368 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 CTCFL-207ENST00000429804 3864 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 PDGFD-202ENST00000393158 3801 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 AP3B2-202ENST00000535348 3254 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 KCNIP4-204ENST00000382150 1645 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 AC091181.1-201ENST00000623762 2098 ntBASIC8.65□□□□□ -1.03
SVIPQ8NHG7 VIPAS39-211ENST00000557658 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 PLA2G4D-201ENST00000290472 3584 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 RHBDF2-215ENST00000591885 3599 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
SVIPQ8NHG7 MYO19-213ENST00000614623 4054 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 BORA-206ENST00000613797 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ZIM2-207ENST00000601070 1965 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 NRP1-206ENST00000374867 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 DSTYK-201ENST00000367161 7739 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 SCN5A-208ENST00000450102 6284 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 DHRS9-208ENST00000602501 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 BEND3-201ENST00000369042 6200 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 AC015802.1-201ENST00000588104 1449 ntBASIC8.64□□□□□ -1.03
SVIPQ8NHG7 SPIN3-218ENST00000639007 4277 ntAPPRIS P1 TSL 4 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 TNFRSF10B-201ENST00000276431 4146 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ACOX1-202ENST00000301608 2215 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 AL136526.1-201ENST00000624456 2203 ntBASIC8.64□□□□□ -1.03
SVIPQ8NHG7 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 AL136455.1-201ENST00000441083 1240 ntBASIC8.64□□□□□ -1.03
SVIPQ8NHG7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 HIPK1-AS1-204ENST00000450706 2117 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ZNF141-204ENST00000505939 2146 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 EPB41L1-218ENST00000628415 3287 ntTSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 POTEE-205ENST00000626191 2027 ntTSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 NCAM1-213ENST00000531044 2826 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 ZNF287-202ENST00000395825 3208 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 CAGE1-202ENST00000338150 2771 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC8.64□□□□□ -1.03
SVIPQ8NHG7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms