RNA–Protein interactions for RNA: ENST00000535348.5

AP3B2-202, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 1 (best) BASIC

Gene AP3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-202ENST00000535348 NISCHQ9Y2I1 1504 aa24.63■■□□□ 1.53
AP3B2-202ENST00000535348 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
AP3B2-202ENST00000535348 SHROOM4Q9ULL8 1493 aa20.77■□□□□ 0.91
AP3B2-202ENST00000535348 ZCCHC6Q5VYS8 1495 aaKnown RBP20.66■□□□□ 0.9
AP3B2-202ENST00000535348 DCAF8L2P0C7V8 631 aa20.54■□□□□ 0.88
AP3B2-202ENST00000535348 ABCC9O60706 1549 aa20.52■□□□□ 0.87
AP3B2-202ENST00000535348 DCAF1Q9Y4B6 1507 aa20.33■□□□□ 0.85
AP3B2-202ENST00000535348 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
AP3B2-202ENST00000535348 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.81
AP3B2-202ENST00000535348 NACADO15069 1562 aa20.08■□□□□ 0.8
AP3B2-202ENST00000535348 RB1CC1Q8TDY2 1594 aa19.94■□□□□ 0.78
AP3B2-202ENST00000535348 SCRIBQ14160 1630 aa19.81■□□□□ 0.76
AP3B2-202ENST00000535348 HRCP23327 699 aa19.58■□□□□ 0.73
AP3B2-202ENST00000535348 UNC13AQ9UPW8 1703 aa19.58■□□□□ 0.72
AP3B2-202ENST00000535348 CHIC1Q5VXU3 224 aa19.52■□□□□ 0.72
AP3B2-202ENST00000535348 PCGF6Q9BYE7 350 aa19.43■□□□□ 0.7
AP3B2-202ENST00000535348 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
AP3B2-202ENST00000535348 PABPN1Q86U42 306 aaKnown RBP eCLIP19.34■□□□□ 0.69
AP3B2-202ENST00000535348 PPARGC1BQ86YN6 1023 aaKnown RBP19.24■□□□□ 0.67
AP3B2-202ENST00000535348 EHMT2Q96KQ7 1210 aa19.23■□□□□ 0.67
AP3B2-202ENST00000535348 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
AP3B2-202ENST00000535348 LOC105371045A0A1W2PR82 267 aa19.08■□□□□ 0.65
AP3B2-202ENST00000535348 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
AP3B2-202ENST00000535348 MROH2BQ7Z745 1585 aa19.04■□□□□ 0.64
AP3B2-202ENST00000535348 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.64
AP3B2-202ENST00000535348 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
AP3B2-202ENST00000535348 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
AP3B2-202ENST00000535348 WIZO95785 1651 aa18.89■□□□□ 0.61
AP3B2-202ENST00000535348 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
AP3B2-202ENST00000535348 EIF4G1Q04637 1599 aaKnown RBP18.79■□□□□ 0.6
AP3B2-202ENST00000535348 PEG3Q9GZU2 1588 aa18.73■□□□□ 0.59
AP3B2-202ENST00000535348 ATAD2BQ9ULI0 1458 aa18.68■□□□□ 0.58
AP3B2-202ENST00000535348 SMARCA2P51531 1590 aa18.65■□□□□ 0.58
AP3B2-202ENST00000535348 TOP2AP11388 1531 aaKnown RBP18.65■□□□□ 0.58
AP3B2-202ENST00000535348 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
AP3B2-202ENST00000535348 ZEB1P37275 1124 aaPredicted RBP18.57■□□□□ 0.56
AP3B2-202ENST00000535348 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
AP3B2-202ENST00000535348 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
AP3B2-202ENST00000535348 NCAPD3P42695 1498 aa18.54■□□□□ 0.56
AP3B2-202ENST00000535348 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
AP3B2-202ENST00000535348 TTBK1Q5TCY1 1321 aaPredicted RBP18.48■□□□□ 0.55
AP3B2-202ENST00000535348 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
AP3B2-202ENST00000535348 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.52
AP3B2-202ENST00000535348 PELP1Q8IZL8 1130 aaKnown RBP18.31■□□□□ 0.52
AP3B2-202ENST00000535348 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
AP3B2-202ENST00000535348 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.14■□□□□ 0.49
AP3B2-202ENST00000535348 RANGAP1P46060 587 aaPredicted RBP18.13■□□□□ 0.49
AP3B2-202ENST00000535348 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
AP3B2-202ENST00000535348 CFTRP13569 1480 aa18.1■□□□□ 0.49
AP3B2-202ENST00000535348 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
AP3B2-202ENST00000535348 CADPSQ9ULU8 1353 aa18.06■□□□□ 0.48
AP3B2-202ENST00000535348 ACIN1Q9UKV3 1341 aaKnown RBP18■□□□□ 0.47
AP3B2-202ENST00000535348 PRDM2Q13029 1718 aa17.99■□□□□ 0.47
AP3B2-202ENST00000535348 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
AP3B2-202ENST00000535348 NESP48681 1621 aa17.98■□□□□ 0.47
AP3B2-202ENST00000535348 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
AP3B2-202ENST00000535348 LAMC3Q9Y6N6 1575 aa17.93■□□□□ 0.46
AP3B2-202ENST00000535348 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
AP3B2-202ENST00000535348 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
AP3B2-202ENST00000535348 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
AP3B2-202ENST00000535348 FANCD2Q9BXW9 1451 aa17.87■□□□□ 0.45
AP3B2-202ENST00000535348 GTF3C3Q9Y5Q9 886 aa17.87■□□□□ 0.45
AP3B2-202ENST00000535348 CENPBP07199 599 aaPredicted RBP17.85■□□□□ 0.45
AP3B2-202ENST00000535348 TOP2BQ02880 1626 aa17.81■□□□□ 0.44
AP3B2-202ENST00000535348 CUX1P39880 1505 aa17.8■□□□□ 0.44
AP3B2-202ENST00000535348 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
AP3B2-202ENST00000535348 BIVM-ERCC5R4GMW8 1640 aa17.79■□□□□ 0.44
AP3B2-202ENST00000535348 CEP164Q9UPV0 1460 aa17.76■□□□□ 0.43
AP3B2-202ENST00000535348 KIF21AQ7Z4S6 1674 aa17.75■□□□□ 0.43
AP3B2-202ENST00000535348 SOGA1O94964 1423 aa17.73■□□□□ 0.43
AP3B2-202ENST00000535348 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
AP3B2-202ENST00000535348 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
AP3B2-202ENST00000535348 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
AP3B2-202ENST00000535348 URB2Q14146 1524 aaKnown RBP17.66■□□□□ 0.42
AP3B2-202ENST00000535348 TOPBP1Q92547 1522 aa17.66■□□□□ 0.42
AP3B2-202ENST00000535348 ZNF316A6NFI3 1004 aaPredicted RBP17.66■□□□□ 0.42
AP3B2-202ENST00000535348 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.42
AP3B2-202ENST00000535348 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
AP3B2-202ENST00000535348 TNIKQ9UKE5 1360 aa17.61■□□□□ 0.41
AP3B2-202ENST00000535348 CSRNP3Q8WYN3 585 aa17.59■□□□□ 0.41
AP3B2-202ENST00000535348 ERCC6Q03468 1493 aa17.59■□□□□ 0.41
AP3B2-202ENST00000535348 EEA1Q15075 1411 aa17.58■□□□□ 0.4
AP3B2-202ENST00000535348 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
AP3B2-202ENST00000535348 MRC2Q9UBG0 1479 aa17.57■□□□□ 0.4
AP3B2-202ENST00000535348 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
AP3B2-202ENST00000535348 RAD54L2Q9Y4B4 1467 aa17.52■□□□□ 0.4
AP3B2-202ENST00000535348 MIER1Q8N108 512 aa17.5■□□□□ 0.39
AP3B2-202ENST00000535348 WDR62O43379 1518 aa17.49■□□□□ 0.39
AP3B2-202ENST00000535348 KIF27Q86VH2 1401 aa17.49■□□□□ 0.39
AP3B2-202ENST00000535348 CUX2O14529 1486 aa17.49■□□□□ 0.39
AP3B2-202ENST00000535348 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
AP3B2-202ENST00000535348 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
AP3B2-202ENST00000535348 MYT1Q01538 1121 aa17.47■□□□□ 0.39
AP3B2-202ENST00000535348 ABCA10Q8WWZ4 1543 aa17.46■□□□□ 0.39
AP3B2-202ENST00000535348 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
AP3B2-202ENST00000535348 TARBP1Q13395 1621 aaKnown RBP17.41■□□□□ 0.38
AP3B2-202ENST00000535348 KIF21BO75037 1637 aa17.37■□□□□ 0.37
AP3B2-202ENST00000535348 IGF1RP08069 1367 aa17.37■□□□□ 0.37
AP3B2-202ENST00000535348 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
AP3B2-202ENST00000535348 PRXQ9BXM0 1461 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms