RNA–Protein interactions for RNA: ENST00000429804.7

CTCFL-207, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 3,864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-207ENST00000429804 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
CTCFL-207ENST00000429804 SHROOM4Q9ULL8 1493 aa18.96■□□□□ 0.63
CTCFL-207ENST00000429804 SUPT5HO00267 1087 aaKnown RBP18.74■□□□□ 0.59
CTCFL-207ENST00000429804 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
CTCFL-207ENST00000429804 CCDC180Q9P1Z9 1646 aa18.3■□□□□ 0.52
CTCFL-207ENST00000429804 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
CTCFL-207ENST00000429804 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
CTCFL-207ENST00000429804 PCGF6Q9BYE7 350 aa17.79■□□□□ 0.44
CTCFL-207ENST00000429804 MYO15BQ96JP2 1530 aa17.75■□□□□ 0.43
CTCFL-207ENST00000429804 HRCP23327 699 aa17.66■□□□□ 0.42
CTCFL-207ENST00000429804 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
CTCFL-207ENST00000429804 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
CTCFL-207ENST00000429804 ABCC9O60706 1549 aa17.54■□□□□ 0.4
CTCFL-207ENST00000429804 PPARGC1BQ86YN6 1023 aaKnown RBP17.41■□□□□ 0.38
CTCFL-207ENST00000429804 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
CTCFL-207ENST00000429804 FAM9AQ8IZU1 332 aaPredicted RBP17.39■□□□□ 0.37
CTCFL-207ENST00000429804 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
CTCFL-207ENST00000429804 SCRIBQ14160 1630 aa17.27■□□□□ 0.35
CTCFL-207ENST00000429804 TRIM26Q12899 539 aaPredicted RBP17.26■□□□□ 0.35
CTCFL-207ENST00000429804 NACADO15069 1562 aa17.16■□□□□ 0.34
CTCFL-207ENST00000429804 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
CTCFL-207ENST00000429804 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
CTCFL-207ENST00000429804 ZEB1P37275 1124 aaPredicted RBP16.96■□□□□ 0.31
CTCFL-207ENST00000429804 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
CTCFL-207ENST00000429804 TTBK1Q5TCY1 1321 aaPredicted RBP16.84■□□□□ 0.29
CTCFL-207ENST00000429804 PABPN1Q86U42 306 aaKnown RBP eCLIP16.83■□□□□ 0.28
CTCFL-207ENST00000429804 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
CTCFL-207ENST00000429804 CCER1Q8TC90 406 aaPredicted RBP16.73■□□□□ 0.27
CTCFL-207ENST00000429804 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
CTCFL-207ENST00000429804 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
CTCFL-207ENST00000429804 WIZO95785 1651 aa16.67■□□□□ 0.26
CTCFL-207ENST00000429804 UBTFP17480 764 aaKnown RBP16.62■□□□□ 0.25
CTCFL-207ENST00000429804 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
CTCFL-207ENST00000429804 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
CTCFL-207ENST00000429804 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
CTCFL-207ENST00000429804 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
CTCFL-207ENST00000429804 CCDC88BA6NC98 1476 aa16.43■□□□□ 0.22
CTCFL-207ENST00000429804 SMARCA4P51532 1647 aa16.39■□□□□ 0.21
CTCFL-207ENST00000429804 SOGA1O94964 1423 aa16.38■□□□□ 0.21
CTCFL-207ENST00000429804 CEP162Q5TB80 1403 aa16.38■□□□□ 0.21
CTCFL-207ENST00000429804 TOP2AP11388 1531 aaKnown RBP16.36■□□□□ 0.21
CTCFL-207ENST00000429804 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
CTCFL-207ENST00000429804 DIEXFQ68CQ4 756 aaKnown RBP16.35■□□□□ 0.21
CTCFL-207ENST00000429804 APLP2Q06481 763 aa16.35■□□□□ 0.21
CTCFL-207ENST00000429804 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
CTCFL-207ENST00000429804 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
CTCFL-207ENST00000429804 MYT1Q01538 1121 aa16.29■□□□□ 0.2
CTCFL-207ENST00000429804 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
CTCFL-207ENST00000429804 CENPBP07199 599 aaPredicted RBP16.27■□□□□ 0.2
CTCFL-207ENST00000429804 BICRAQ9NZM4 1560 aa16.27■□□□□ 0.19
CTCFL-207ENST00000429804 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
CTCFL-207ENST00000429804 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
CTCFL-207ENST00000429804 EEA1Q15075 1411 aa16.22■□□□□ 0.19
CTCFL-207ENST00000429804 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
CTCFL-207ENST00000429804 BAZ1BQ9UIG0 1483 aaKnown RBP16.21■□□□□ 0.19
CTCFL-207ENST00000429804 ACIN1Q9UKV3 1341 aaKnown RBP16.21■□□□□ 0.19
CTCFL-207ENST00000429804 EIF4G1Q04637 1599 aaKnown RBP16.21■□□□□ 0.19
CTCFL-207ENST00000429804 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
CTCFL-207ENST00000429804 YTHDC1Q96MU7 727 aaKnown RBP16.2■□□□□ 0.18
CTCFL-207ENST00000429804 GOLGA3Q08378 1498 aa16.19■□□□□ 0.18
CTCFL-207ENST00000429804 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
CTCFL-207ENST00000429804 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
CTCFL-207ENST00000429804 GTF3C3Q9Y5Q9 886 aa16.13■□□□□ 0.17
CTCFL-207ENST00000429804 CLIP1P30622 1438 aa16.1■□□□□ 0.17
CTCFL-207ENST00000429804 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
CTCFL-207ENST00000429804 PEG3Q9GZU2 1588 aa15.99■□□□□ 0.15
CTCFL-207ENST00000429804 SYNJ1O43426 1573 aa15.95■□□□□ 0.14
CTCFL-207ENST00000429804 ITGAEP38570 1179 aa15.95■□□□□ 0.14
CTCFL-207ENST00000429804 VPS8Q8N3P4 1428 aa15.94■□□□□ 0.14
CTCFL-207ENST00000429804 RAPGEF2Q9Y4G8 1499 aa15.94■□□□□ 0.14
CTCFL-207ENST00000429804 MIER1Q8N108 512 aa15.94■□□□□ 0.14
CTCFL-207ENST00000429804 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
CTCFL-207ENST00000429804 KIF21BO75037 1637 aa15.84■□□□□ 0.13
CTCFL-207ENST00000429804 ATP1B4Q9UN42 357 aaPredicted RBP15.84■□□□□ 0.13
CTCFL-207ENST00000429804 KANK4Q5T7N3 995 aaPredicted RBP15.81■□□□□ 0.12
CTCFL-207ENST00000429804 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
CTCFL-207ENST00000429804 KIF27Q86VH2 1401 aa15.74■□□□□ 0.11
CTCFL-207ENST00000429804 P3H3Q8IVL6 736 aa15.69■□□□□ 0.1
CTCFL-207ENST00000429804 CADPSQ9ULU8 1353 aa15.69■□□□□ 0.1
CTCFL-207ENST00000429804 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
CTCFL-207ENST00000429804 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
CTCFL-207ENST00000429804 DHX57Q6P158 1386 aaKnown RBP15.66■□□□□ 0.1
CTCFL-207ENST00000429804 CFTRP13569 1480 aa15.66■□□□□ 0.1
CTCFL-207ENST00000429804 CLSPNQ9HAW4 1339 aa15.64■□□□□ 0.09
CTCFL-207ENST00000429804 PRXQ9BXM0 1461 aa15.64■□□□□ 0.09
CTCFL-207ENST00000429804 ARAP1Q96P48 1450 aa15.63■□□□□ 0.09
CTCFL-207ENST00000429804 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
CTCFL-207ENST00000429804 CC2D2AQ9P2K1 1620 aa15.6■□□□□ 0.09
CTCFL-207ENST00000429804 ERICH3Q5RHP9 1530 aa15.6■□□□□ 0.09
CTCFL-207ENST00000429804 CUX1P39880 1505 aa15.59■□□□□ 0.09
CTCFL-207ENST00000429804 CUX2O14529 1486 aa15.59■□□□□ 0.09
CTCFL-207ENST00000429804 BIVM-ERCC5R4GMW8 1640 aa15.53■□□□□ 0.08
CTCFL-207ENST00000429804 CARMIL1Q5VZK9 1371 aa15.53■□□□□ 0.08
CTCFL-207ENST00000429804 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.07
CTCFL-207ENST00000429804 FANCD2Q9BXW9 1451 aa15.5■□□□□ 0.07
CTCFL-207ENST00000429804 RAB3GAP2Q9H2M9 1393 aa15.5■□□□□ 0.07
CTCFL-207ENST00000429804 IGF1RP08069 1367 aa15.49■□□□□ 0.07
CTCFL-207ENST00000429804 RRBP1Q9P2E9 1410 aaKnown RBP15.49■□□□□ 0.07
CTCFL-207ENST00000429804 SIN3AQ96ST3 1273 aa15.48■□□□□ 0.07
CTCFL-207ENST00000429804 DDX10Q13206 875 aaKnown RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms